Protein–RNA interactions for Protein: Q9CPN9

2210010C04Rik, RIKEN cDNA 2210010C04 gene, mousemouse

Known RBP Predictions only

Length 247 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
2210010C04RikQ9CPN9 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC23.55■■□□□ 1.36
2210010C04RikQ9CPN9 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC23.54■■□□□ 1.36
2210010C04RikQ9CPN9 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC23.53■■□□□ 1.36
2210010C04RikQ9CPN9 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
2210010C04RikQ9CPN9 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
2210010C04RikQ9CPN9 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
2210010C04RikQ9CPN9 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
2210010C04RikQ9CPN9 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
2210010C04RikQ9CPN9 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
2210010C04RikQ9CPN9 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
2210010C04RikQ9CPN9 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
2210010C04RikQ9CPN9 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC23.41■■□□□ 1.34
2210010C04RikQ9CPN9 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
2210010C04RikQ9CPN9 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
2210010C04RikQ9CPN9 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC23.35■■□□□ 1.33
2210010C04RikQ9CPN9 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC23.31■■□□□ 1.32
2210010C04RikQ9CPN9 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC23.3■■□□□ 1.32
2210010C04RikQ9CPN9 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC23.26■■□□□ 1.31
2210010C04RikQ9CPN9 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
2210010C04RikQ9CPN9 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC23.25■■□□□ 1.31
2210010C04RikQ9CPN9 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC23.24■■□□□ 1.31
2210010C04RikQ9CPN9 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
2210010C04RikQ9CPN9 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
2210010C04RikQ9CPN9 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
2210010C04RikQ9CPN9 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC23.18■■□□□ 1.3
2210010C04RikQ9CPN9 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
2210010C04RikQ9CPN9 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
2210010C04RikQ9CPN9 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC23.11■■□□□ 1.29
2210010C04RikQ9CPN9 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC23.09■■□□□ 1.29
2210010C04RikQ9CPN9 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
2210010C04RikQ9CPN9 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC23.08■■□□□ 1.29
2210010C04RikQ9CPN9 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
2210010C04RikQ9CPN9 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
2210010C04RikQ9CPN9 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
2210010C04RikQ9CPN9 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
2210010C04RikQ9CPN9 Rab21-202ENSMUST00000218831 843 ntBASIC23.03■■□□□ 1.28
2210010C04RikQ9CPN9 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC23.02■■□□□ 1.28
2210010C04RikQ9CPN9 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC23■■□□□ 1.27
2210010C04RikQ9CPN9 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC22.96■■□□□ 1.27
2210010C04RikQ9CPN9 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC22.95■■□□□ 1.26
2210010C04RikQ9CPN9 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
2210010C04RikQ9CPN9 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC22.92■■□□□ 1.26
2210010C04RikQ9CPN9 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
2210010C04RikQ9CPN9 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC22.89■■□□□ 1.25
2210010C04RikQ9CPN9 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC22.87■■□□□ 1.25
2210010C04RikQ9CPN9 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
2210010C04RikQ9CPN9 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
2210010C04RikQ9CPN9 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC22.84■■□□□ 1.25
2210010C04RikQ9CPN9 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
2210010C04RikQ9CPN9 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
2210010C04RikQ9CPN9 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC22.81■■□□□ 1.24
2210010C04RikQ9CPN9 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
2210010C04RikQ9CPN9 Zfp131-207ENSMUST00000224946 1783 ntBASIC22.78■■□□□ 1.24
2210010C04RikQ9CPN9 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC22.78■■□□□ 1.24
2210010C04RikQ9CPN9 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC22.78■■□□□ 1.24
2210010C04RikQ9CPN9 Gm2415-204ENSMUST00000190235 2004 ntBASIC22.75■■□□□ 1.23
2210010C04RikQ9CPN9 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC22.75■■□□□ 1.23
2210010C04RikQ9CPN9 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC22.74■■□□□ 1.23
2210010C04RikQ9CPN9 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
2210010C04RikQ9CPN9 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC22.71■■□□□ 1.23
2210010C04RikQ9CPN9 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
2210010C04RikQ9CPN9 Gm25262-201ENSMUST00000174934 133 ntBASIC22.7■■□□□ 1.22
2210010C04RikQ9CPN9 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
2210010C04RikQ9CPN9 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC22.7■■□□□ 1.22
2210010C04RikQ9CPN9 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
2210010C04RikQ9CPN9 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
2210010C04RikQ9CPN9 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
2210010C04RikQ9CPN9 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
2210010C04RikQ9CPN9 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
2210010C04RikQ9CPN9 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC22.66■■□□□ 1.22
2210010C04RikQ9CPN9 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC22.66■■□□□ 1.22
2210010C04RikQ9CPN9 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC22.65■■□□□ 1.22
2210010C04RikQ9CPN9 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC22.65■■□□□ 1.22
2210010C04RikQ9CPN9 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
2210010C04RikQ9CPN9 AC153504.1-201ENSMUST00000218379 2290 ntBASIC22.64■■□□□ 1.22
2210010C04RikQ9CPN9 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
2210010C04RikQ9CPN9 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
2210010C04RikQ9CPN9 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC22.63■■□□□ 1.21
2210010C04RikQ9CPN9 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
2210010C04RikQ9CPN9 Gm6658-202ENSMUST00000209493 1885 ntBASIC22.59■■□□□ 1.21
2210010C04RikQ9CPN9 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC22.54■■□□□ 1.2
2210010C04RikQ9CPN9 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
2210010C04RikQ9CPN9 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
2210010C04RikQ9CPN9 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC22.49■■□□□ 1.19
2210010C04RikQ9CPN9 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
2210010C04RikQ9CPN9 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
2210010C04RikQ9CPN9 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
2210010C04RikQ9CPN9 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
2210010C04RikQ9CPN9 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
2210010C04RikQ9CPN9 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
2210010C04RikQ9CPN9 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC22.42■■□□□ 1.18
2210010C04RikQ9CPN9 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
2210010C04RikQ9CPN9 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
2210010C04RikQ9CPN9 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
2210010C04RikQ9CPN9 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
2210010C04RikQ9CPN9 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC22.39■■□□□ 1.18
2210010C04RikQ9CPN9 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC22.37■■□□□ 1.17
2210010C04RikQ9CPN9 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
2210010C04RikQ9CPN9 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC22.34■■□□□ 1.17
2210010C04RikQ9CPN9 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
Retrieved 100 of 76,532 protein–RNA pairs in 77.2 ms