Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC27,1■■□□□ 1,93
Trim33Q99PP7 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC27,09■■□□□ 1,93
Trim33Q99PP7 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC27,08■■□□□ 1,93
Trim33Q99PP7 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC27,07■■□□□ 1,92
Trim33Q99PP7 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC27,05■■□□□ 1,92
Trim33Q99PP7 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC27,04■■□□□ 1,92
Trim33Q99PP7 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC27,03■■□□□ 1,92
Trim33Q99PP7 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC27■■□□□ 1,91
Trim33Q99PP7 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC26,98■■□□□ 1,91
Trim33Q99PP7 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC26,97■■□□□ 1,91
Trim33Q99PP7 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC26,97■■□□□ 1,91
Trim33Q99PP7 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC26,96■■□□□ 1,91
Trim33Q99PP7 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC26,96■■□□□ 1,91
Trim33Q99PP7 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC26,93■■□□□ 1,9
Trim33Q99PP7 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC26,92■■□□□ 1,9
Trim33Q99PP7 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC26,9■■□□□ 1,9
Trim33Q99PP7 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC26,89■■□□□ 1,89
Trim33Q99PP7 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC26,89■■□□□ 1,89
Trim33Q99PP7 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC26,87■■□□□ 1,89
Trim33Q99PP7 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC26,82■■□□□ 1,88
Trim33Q99PP7 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC26,81■■□□□ 1,88
Trim33Q99PP7 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC26,8■■□□□ 1,88
Trim33Q99PP7 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC26,74■■□□□ 1,87
Trim33Q99PP7 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC26,72■■□□□ 1,87
Trim33Q99PP7 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC26,71■■□□□ 1,87
Trim33Q99PP7 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC26,69■■□□□ 1,86
Trim33Q99PP7 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC26,68■■□□□ 1,86
Trim33Q99PP7 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC26,65■■□□□ 1,86
Trim33Q99PP7 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC26,64■■□□□ 1,86
Trim33Q99PP7 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC26,63■■□□□ 1,85
Trim33Q99PP7 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC26,63■■□□□ 1,85
Trim33Q99PP7 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC26,62■■□□□ 1,85
Trim33Q99PP7 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC26,61■■□□□ 1,85
Trim33Q99PP7 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC26,6■■□□□ 1,85
Trim33Q99PP7 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC26,56■■□□□ 1,84
Trim33Q99PP7 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC26,52■■□□□ 1,84
Trim33Q99PP7 Zfp131-207ENSMUST00000224946 1783 ntBASIC26,51■■□□□ 1,83
Trim33Q99PP7 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC26,51■■□□□ 1,83
Trim33Q99PP7 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC26,49■■□□□ 1,83
Trim33Q99PP7 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC26,48■■□□□ 1,83
Trim33Q99PP7 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC26,48■■□□□ 1,83
Trim33Q99PP7 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC26,42■■□□□ 1,82
Trim33Q99PP7 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC26,42■■□□□ 1,82
Trim33Q99PP7 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC26,4■■□□□ 1,82
Trim33Q99PP7 Gm17082-201ENSMUST00000166043 1091 ntBASIC26,38■■□□□ 1,81
Trim33Q99PP7 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC26,37■■□□□ 1,81
Trim33Q99PP7 Gm26115-201ENSMUST00000175605 87 ntBASIC26,37■■□□□ 1,81
Trim33Q99PP7 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC26,37■■□□□ 1,81
Trim33Q99PP7 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC26,35■■□□□ 1,81
Trim33Q99PP7 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC26,35■■□□□ 1,81
Trim33Q99PP7 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC26,35■■□□□ 1,81
Trim33Q99PP7 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC26,31■■□□□ 1,8
Trim33Q99PP7 Gm8109-201ENSMUST00000194076 746 ntBASIC26,3■■□□□ 1,8
Trim33Q99PP7 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC26,29■■□□□ 1,8
Trim33Q99PP7 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC26,29■■□□□ 1,8
Trim33Q99PP7 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC26,29■■□□□ 1,8
Trim33Q99PP7 AL845457.1-201ENSMUST00000197244 68 ntBASIC26,27■■□□□ 1,8
Trim33Q99PP7 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC26,27■■□□□ 1,8
Trim33Q99PP7 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC26,26■■□□□ 1,79
Trim33Q99PP7 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC26,26■■□□□ 1,79
Trim33Q99PP7 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC26,24■■□□□ 1,79
Trim33Q99PP7 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC26,24■■□□□ 1,79
Trim33Q99PP7 Gm27322-201ENSMUST00000184007 104 ntBASIC26,23■■□□□ 1,79
Trim33Q99PP7 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC26,23■■□□□ 1,79
Trim33Q99PP7 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC26,22■■□□□ 1,79
Trim33Q99PP7 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC26,21■■□□□ 1,79
Trim33Q99PP7 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC26,19■■□□□ 1,78
Trim33Q99PP7 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC26,14■■□□□ 1,78
Trim33Q99PP7 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC26,13■■□□□ 1,77
Trim33Q99PP7 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC26,11■■□□□ 1,77
Trim33Q99PP7 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC26,11■■□□□ 1,77
Trim33Q99PP7 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC26,07■■□□□ 1,76
Trim33Q99PP7 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC26,07■■□□□ 1,76
Trim33Q99PP7 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC26,04■■□□□ 1,76
Trim33Q99PP7 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC26,03■■□□□ 1,76
Trim33Q99PP7 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC26,02■■□□□ 1,76
Trim33Q99PP7 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC26,01■■□□□ 1,75
Trim33Q99PP7 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1,75
Trim33Q99PP7 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC25,99■■□□□ 1,75
Trim33Q99PP7 AC166822.3-201ENSMUST00000227394 661 ntBASIC25,97■■□□□ 1,75
Trim33Q99PP7 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC25,93■■□□□ 1,74
Trim33Q99PP7 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC25,9■■□□□ 1,74
Trim33Q99PP7 Mipep-204ENSMUST00000225043 1548 ntBASIC25,9■■□□□ 1,74
Trim33Q99PP7 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC25,9■■□□□ 1,74
Trim33Q99PP7 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC25,89■■□□□ 1,73
Trim33Q99PP7 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC25,88■■□□□ 1,73
Trim33Q99PP7 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC25,86■■□□□ 1,73
Trim33Q99PP7 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC25,85■■□□□ 1,73
Trim33Q99PP7 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC25,82■■□□□ 1,72
Trim33Q99PP7 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC25,8■■□□□ 1,72
Trim33Q99PP7 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC25,78■■□□□ 1,72
Trim33Q99PP7 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC25,78■■□□□ 1,72
Trim33Q99PP7 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC25,75■■□□□ 1,71
Trim33Q99PP7 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC25,75■■□□□ 1,71
Trim33Q99PP7 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC25,73■■□□□ 1,71
Trim33Q99PP7 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC25,73■■□□□ 1,71
Trim33Q99PP7 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC25,72■■□□□ 1,71
Trim33Q99PP7 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC25,7■■□□□ 1,7
Trim33Q99PP7 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC25,7■■□□□ 1,7
Trim33Q99PP7 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC25,68■■□□□ 1,7
Retrieved 100 of 76,532 protein–RNA pairs in 11 ms