Protein–RNA interactions for Protein: Q99MT2

Msh4, MutS protein homolog 4, mousemouse

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh4Q99MT2 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC26.64■■□□□ 1.85
Msh4Q99MT2 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC26.63■■□□□ 1.85
Msh4Q99MT2 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC26.63■■□□□ 1.85
Msh4Q99MT2 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
Msh4Q99MT2 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Msh4Q99MT2 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Msh4Q99MT2 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Msh4Q99MT2 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC26.56■■□□□ 1.84
Msh4Q99MT2 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC26.5■■□□□ 1.83
Msh4Q99MT2 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC26.48■■□□□ 1.83
Msh4Q99MT2 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Msh4Q99MT2 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Msh4Q99MT2 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC26.44■■□□□ 1.82
Msh4Q99MT2 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC26.42■■□□□ 1.82
Msh4Q99MT2 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC26.42■■□□□ 1.82
Msh4Q99MT2 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC26.39■■□□□ 1.82
Msh4Q99MT2 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC26.39■■□□□ 1.81
Msh4Q99MT2 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Msh4Q99MT2 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC26.35■■□□□ 1.81
Msh4Q99MT2 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC26.33■■□□□ 1.8
Msh4Q99MT2 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.8
Msh4Q99MT2 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
Msh4Q99MT2 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Msh4Q99MT2 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
Msh4Q99MT2 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC26.28■■□□□ 1.8
Msh4Q99MT2 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Msh4Q99MT2 Gm26115-201ENSMUST00000175605 87 ntBASIC26.22■■□□□ 1.79
Msh4Q99MT2 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC26.22■■□□□ 1.79
Msh4Q99MT2 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Msh4Q99MT2 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
Msh4Q99MT2 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC26.19■■□□□ 1.78
Msh4Q99MT2 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Msh4Q99MT2 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC26.18■■□□□ 1.78
Msh4Q99MT2 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
Msh4Q99MT2 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Msh4Q99MT2 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC26.16■■□□□ 1.78
Msh4Q99MT2 Gm8109-201ENSMUST00000194076 746 ntBASIC26.11■■□□□ 1.77
Msh4Q99MT2 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC26.11■■□□□ 1.77
Msh4Q99MT2 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
Msh4Q99MT2 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
Msh4Q99MT2 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Msh4Q99MT2 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
Msh4Q99MT2 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC26.01■■□□□ 1.75
Msh4Q99MT2 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC26■■□□□ 1.75
Msh4Q99MT2 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
Msh4Q99MT2 Gm17082-201ENSMUST00000166043 1091 ntBASIC25.96■■□□□ 1.75
Msh4Q99MT2 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC25.96■■□□□ 1.75
Msh4Q99MT2 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.75
Msh4Q99MT2 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
Msh4Q99MT2 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC25.88■■□□□ 1.73
Msh4Q99MT2 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Msh4Q99MT2 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Msh4Q99MT2 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
Msh4Q99MT2 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC25.85■■□□□ 1.73
Msh4Q99MT2 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC25.82■■□□□ 1.72
Msh4Q99MT2 Gm27322-201ENSMUST00000184007 104 ntBASIC25.79■■□□□ 1.72
Msh4Q99MT2 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC25.78■■□□□ 1.72
Msh4Q99MT2 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC25.78■■□□□ 1.72
Msh4Q99MT2 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC25.78■■□□□ 1.72
Msh4Q99MT2 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
Msh4Q99MT2 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC25.72■■□□□ 1.71
Msh4Q99MT2 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
Msh4Q99MT2 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
Msh4Q99MT2 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
Msh4Q99MT2 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC25.69■■□□□ 1.7
Msh4Q99MT2 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC25.67■■□□□ 1.7
Msh4Q99MT2 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC25.65■■□□□ 1.7
Msh4Q99MT2 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
Msh4Q99MT2 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Msh4Q99MT2 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC25.62■■□□□ 1.69
Msh4Q99MT2 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC25.62■■□□□ 1.69
Msh4Q99MT2 Zfp131-207ENSMUST00000224946 1783 ntBASIC25.61■■□□□ 1.69
Msh4Q99MT2 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC25.61■■□□□ 1.69
Msh4Q99MT2 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
Msh4Q99MT2 AL845457.1-201ENSMUST00000197244 68 ntBASIC25.58■■□□□ 1.69
Msh4Q99MT2 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
Msh4Q99MT2 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Msh4Q99MT2 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Msh4Q99MT2 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Msh4Q99MT2 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Msh4Q99MT2 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC25.51■■□□□ 1.67
Msh4Q99MT2 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
Msh4Q99MT2 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Msh4Q99MT2 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC25.47■■□□□ 1.67
Msh4Q99MT2 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
Msh4Q99MT2 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC25.42■■□□□ 1.66
Msh4Q99MT2 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC25.41■■□□□ 1.66
Msh4Q99MT2 AC166822.3-201ENSMUST00000227394 661 ntBASIC25.4■■□□□ 1.66
Msh4Q99MT2 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
Msh4Q99MT2 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC25.39■■□□□ 1.66
Msh4Q99MT2 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Msh4Q99MT2 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC25.34■■□□□ 1.65
Msh4Q99MT2 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC25.34■■□□□ 1.65
Msh4Q99MT2 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Msh4Q99MT2 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC25.31■■□□□ 1.64
Msh4Q99MT2 Gm24804-201ENSMUST00000174982 85 ntBASIC25.3■■□□□ 1.64
Msh4Q99MT2 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Msh4Q99MT2 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
Msh4Q99MT2 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Msh4Q99MT2 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC25.23■■□□□ 1.63
Retrieved 100 of 76,532 protein–RNA pairs in 173.9 ms