Protein–RNA interactions for Protein: Q99ML9

Rnf111, E3 ubiquitin-protein ligase Arkadia, mousemouse

Predictions only

Length 989 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf111Q99ML9 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
Rnf111Q99ML9 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
Rnf111Q99ML9 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Rnf111Q99ML9 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC26.59■■□□□ 1.85
Rnf111Q99ML9 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC26.59■■□□□ 1.85
Rnf111Q99ML9 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
Rnf111Q99ML9 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC26.49■■□□□ 1.83
Rnf111Q99ML9 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
Rnf111Q99ML9 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC26.45■■□□□ 1.82
Rnf111Q99ML9 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
Rnf111Q99ML9 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
Rnf111Q99ML9 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Rnf111Q99ML9 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC26.42■■□□□ 1.82
Rnf111Q99ML9 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Rnf111Q99ML9 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
Rnf111Q99ML9 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC26.37■■□□□ 1.81
Rnf111Q99ML9 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC26.37■■□□□ 1.81
Rnf111Q99ML9 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Rnf111Q99ML9 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC26.36■■□□□ 1.81
Rnf111Q99ML9 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Rnf111Q99ML9 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Rnf111Q99ML9 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC26.27■■□□□ 1.8
Rnf111Q99ML9 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC26.27■■□□□ 1.8
Rnf111Q99ML9 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Rnf111Q99ML9 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC26.24■■□□□ 1.79
Rnf111Q99ML9 Rab21-202ENSMUST00000218831 843 ntBASIC26.23■■□□□ 1.79
Rnf111Q99ML9 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
Rnf111Q99ML9 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC26.19■■□□□ 1.78
Rnf111Q99ML9 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC26.19■■□□□ 1.78
Rnf111Q99ML9 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Rnf111Q99ML9 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Rnf111Q99ML9 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC26.09■■□□□ 1.77
Rnf111Q99ML9 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC26.08■■□□□ 1.77
Rnf111Q99ML9 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC26.07■■□□□ 1.76
Rnf111Q99ML9 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Rnf111Q99ML9 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Rnf111Q99ML9 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Rnf111Q99ML9 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC25.97■■□□□ 1.75
Rnf111Q99ML9 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
Rnf111Q99ML9 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
Rnf111Q99ML9 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC25.94■■□□□ 1.74
Rnf111Q99ML9 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
Rnf111Q99ML9 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
Rnf111Q99ML9 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC25.88■■□□□ 1.73
Rnf111Q99ML9 Gm25262-201ENSMUST00000174934 133 ntBASIC25.88■■□□□ 1.73
Rnf111Q99ML9 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
Rnf111Q99ML9 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC25.86■■□□□ 1.73
Rnf111Q99ML9 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC25.79■■□□□ 1.72
Rnf111Q99ML9 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC25.79■■□□□ 1.72
Rnf111Q99ML9 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC25.79■■□□□ 1.72
Rnf111Q99ML9 AC153504.1-201ENSMUST00000218379 2290 ntBASIC25.78■■□□□ 1.72
Rnf111Q99ML9 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC25.78■■□□□ 1.72
Rnf111Q99ML9 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC25.78■■□□□ 1.72
Rnf111Q99ML9 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
Rnf111Q99ML9 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC25.72■■□□□ 1.71
Rnf111Q99ML9 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
Rnf111Q99ML9 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC25.71■■□□□ 1.71
Rnf111Q99ML9 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
Rnf111Q99ML9 Gm2415-204ENSMUST00000190235 2004 ntBASIC25.68■■□□□ 1.7
Rnf111Q99ML9 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
Rnf111Q99ML9 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
Rnf111Q99ML9 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Rnf111Q99ML9 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Rnf111Q99ML9 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
Rnf111Q99ML9 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC25.6■■□□□ 1.69
Rnf111Q99ML9 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC25.59■■□□□ 1.69
Rnf111Q99ML9 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC25.57■■□□□ 1.68
Rnf111Q99ML9 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
Rnf111Q99ML9 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Rnf111Q99ML9 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Rnf111Q99ML9 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
Rnf111Q99ML9 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Rnf111Q99ML9 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC25.51■■□□□ 1.67
Rnf111Q99ML9 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
Rnf111Q99ML9 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Rnf111Q99ML9 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Rnf111Q99ML9 Zfp131-207ENSMUST00000224946 1783 ntBASIC25.49■■□□□ 1.67
Rnf111Q99ML9 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Rnf111Q99ML9 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC25.49■■□□□ 1.67
Rnf111Q99ML9 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
Rnf111Q99ML9 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
Rnf111Q99ML9 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Rnf111Q99ML9 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Rnf111Q99ML9 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
Rnf111Q99ML9 Gm6658-202ENSMUST00000209493 1885 ntBASIC25.42■■□□□ 1.66
Rnf111Q99ML9 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
Rnf111Q99ML9 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC25.38■■□□□ 1.65
Rnf111Q99ML9 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Rnf111Q99ML9 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC25.37■■□□□ 1.65
Rnf111Q99ML9 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
Rnf111Q99ML9 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC25.36■■□□□ 1.65
Rnf111Q99ML9 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC25.33■■□□□ 1.65
Rnf111Q99ML9 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC25.32■■□□□ 1.64
Rnf111Q99ML9 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
Rnf111Q99ML9 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC25.31■■□□□ 1.64
Rnf111Q99ML9 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Rnf111Q99ML9 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC25.3■■□□□ 1.64
Rnf111Q99ML9 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC25.3■■□□□ 1.64
Rnf111Q99ML9 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
Rnf111Q99ML9 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
Retrieved 100 of 76,532 protein–RNA pairs in 9.1 ms