Protein–RNA interactions for Protein: Q8VHQ4

Rab40c, Ras-related protein Rab-40C, mousemouse

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab40cQ8VHQ4 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Rab40cQ8VHQ4 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Rab40cQ8VHQ4 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
Rab40cQ8VHQ4 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Rab40cQ8VHQ4 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC22.17■■□□□ 1.14
Rab40cQ8VHQ4 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC22.17■■□□□ 1.14
Rab40cQ8VHQ4 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Rab40cQ8VHQ4 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
Rab40cQ8VHQ4 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC22.12■■□□□ 1.13
Rab40cQ8VHQ4 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
Rab40cQ8VHQ4 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC22.07■■□□□ 1.12
Rab40cQ8VHQ4 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC22.06■■□□□ 1.12
Rab40cQ8VHQ4 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Rab40cQ8VHQ4 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
Rab40cQ8VHQ4 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
Rab40cQ8VHQ4 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Rab40cQ8VHQ4 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC21.96■■□□□ 1.11
Rab40cQ8VHQ4 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
Rab40cQ8VHQ4 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC21.94■■□□□ 1.1
Rab40cQ8VHQ4 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Rab40cQ8VHQ4 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Rab40cQ8VHQ4 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Rab40cQ8VHQ4 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
Rab40cQ8VHQ4 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Rab40cQ8VHQ4 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Rab40cQ8VHQ4 Gm27325-201ENSMUST00000175467 74 ntBASIC21.87■■□□□ 1.09
Rab40cQ8VHQ4 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Rab40cQ8VHQ4 Gm2415-204ENSMUST00000190235 2004 ntBASIC21.79■■□□□ 1.08
Rab40cQ8VHQ4 AC153504.1-201ENSMUST00000218379 2290 ntBASIC21.76■■□□□ 1.07
Rab40cQ8VHQ4 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC21.76■■□□□ 1.07
Rab40cQ8VHQ4 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Rab40cQ8VHQ4 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
Rab40cQ8VHQ4 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Rab40cQ8VHQ4 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Rab40cQ8VHQ4 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Rab40cQ8VHQ4 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Rab40cQ8VHQ4 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Rab40cQ8VHQ4 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Rab40cQ8VHQ4 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Rab40cQ8VHQ4 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Rab40cQ8VHQ4 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Rab40cQ8VHQ4 Gm6658-202ENSMUST00000209493 1885 ntBASIC21.62■■□□□ 1.05
Rab40cQ8VHQ4 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC21.61■■□□□ 1.05
Rab40cQ8VHQ4 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC21.59■■□□□ 1.05
Rab40cQ8VHQ4 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Rab40cQ8VHQ4 Zfp131-207ENSMUST00000224946 1783 ntBASIC21.58■■□□□ 1.04
Rab40cQ8VHQ4 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Rab40cQ8VHQ4 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
Rab40cQ8VHQ4 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Rab40cQ8VHQ4 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC21.56■■□□□ 1.04
Rab40cQ8VHQ4 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Rab40cQ8VHQ4 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Rab40cQ8VHQ4 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Rab40cQ8VHQ4 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
Rab40cQ8VHQ4 Gm25238-201ENSMUST00000174914 89 ntBASIC21.49■■□□□ 1.03
Rab40cQ8VHQ4 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Rab40cQ8VHQ4 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC21.48■■□□□ 1.03
Rab40cQ8VHQ4 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Rab40cQ8VHQ4 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Rab40cQ8VHQ4 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Rab40cQ8VHQ4 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Rab40cQ8VHQ4 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Rab40cQ8VHQ4 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Rab40cQ8VHQ4 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Rab40cQ8VHQ4 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC21.41■■□□□ 1.02
Rab40cQ8VHQ4 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Rab40cQ8VHQ4 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Rab40cQ8VHQ4 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Rab40cQ8VHQ4 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC21.38■■□□□ 1.01
Rab40cQ8VHQ4 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Rab40cQ8VHQ4 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Rab40cQ8VHQ4 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Rab40cQ8VHQ4 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC21.37■■□□□ 1.01
Rab40cQ8VHQ4 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
Rab40cQ8VHQ4 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Rab40cQ8VHQ4 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC21.32■■□□□ 1
Rab40cQ8VHQ4 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC21.32■■□□□ 1
Rab40cQ8VHQ4 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC21.32■■□□□ 1
Rab40cQ8VHQ4 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC21.28■■□□□ 1
Rab40cQ8VHQ4 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Rab40cQ8VHQ4 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Rab40cQ8VHQ4 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
Rab40cQ8VHQ4 Gm9905-201ENSMUST00000065740 1845 ntBASIC21.25■□□□□ 0.99
Rab40cQ8VHQ4 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rab40cQ8VHQ4 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rab40cQ8VHQ4 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Rab40cQ8VHQ4 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rab40cQ8VHQ4 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Rab40cQ8VHQ4 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC21.2■□□□□ 0.98
Rab40cQ8VHQ4 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
Rab40cQ8VHQ4 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Rab40cQ8VHQ4 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
Rab40cQ8VHQ4 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Rab40cQ8VHQ4 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rab40cQ8VHQ4 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Rab40cQ8VHQ4 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rab40cQ8VHQ4 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
Rab40cQ8VHQ4 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Rab40cQ8VHQ4 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
Rab40cQ8VHQ4 Gm6206-201ENSMUST00000133472 2199 ntBASIC21.1■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 47.4 ms