Protein–RNA interactions for Protein: Q8VE91

Retreg1d, Reticulophagy regulator 1, mousemouse

Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg1dQ8VE91 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
Retreg1dQ8VE91 Gm8109-201ENSMUST00000194076 746 ntBASIC27.24■■□□□ 1.95
Retreg1dQ8VE91 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
Retreg1dQ8VE91 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC27.21■■□□□ 1.95
Retreg1dQ8VE91 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC27.21■■□□□ 1.95
Retreg1dQ8VE91 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC27.2■■□□□ 1.94
Retreg1dQ8VE91 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC27.16■■□□□ 1.94
Retreg1dQ8VE91 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC27.14■■□□□ 1.94
Retreg1dQ8VE91 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC27.12■■□□□ 1.93
Retreg1dQ8VE91 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
Retreg1dQ8VE91 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
Retreg1dQ8VE91 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
Retreg1dQ8VE91 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC27.02■■□□□ 1.92
Retreg1dQ8VE91 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
Retreg1dQ8VE91 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
Retreg1dQ8VE91 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
Retreg1dQ8VE91 Gm17082-201ENSMUST00000166043 1091 ntBASIC26.91■■□□□ 1.9
Retreg1dQ8VE91 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
Retreg1dQ8VE91 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
Retreg1dQ8VE91 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC26.86■■□□□ 1.89
Retreg1dQ8VE91 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC26.84■■□□□ 1.89
Retreg1dQ8VE91 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
Retreg1dQ8VE91 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
Retreg1dQ8VE91 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
Retreg1dQ8VE91 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
Retreg1dQ8VE91 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
Retreg1dQ8VE91 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC26.78■■□□□ 1.88
Retreg1dQ8VE91 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
Retreg1dQ8VE91 Gm27322-201ENSMUST00000184007 104 ntBASIC26.75■■□□□ 1.87
Retreg1dQ8VE91 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC26.74■■□□□ 1.87
Retreg1dQ8VE91 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC26.74■■□□□ 1.87
Retreg1dQ8VE91 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
Retreg1dQ8VE91 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
Retreg1dQ8VE91 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.87
Retreg1dQ8VE91 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC26.7■■□□□ 1.86
Retreg1dQ8VE91 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
Retreg1dQ8VE91 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC26.66■■□□□ 1.86
Retreg1dQ8VE91 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
Retreg1dQ8VE91 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC26.57■■□□□ 1.84
Retreg1dQ8VE91 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
Retreg1dQ8VE91 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC26.56■■□□□ 1.84
Retreg1dQ8VE91 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC26.52■■□□□ 1.84
Retreg1dQ8VE91 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC26.48■■□□□ 1.83
Retreg1dQ8VE91 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC26.45■■□□□ 1.82
Retreg1dQ8VE91 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC26.44■■□□□ 1.82
Retreg1dQ8VE91 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Retreg1dQ8VE91 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
Retreg1dQ8VE91 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Retreg1dQ8VE91 Gm24804-201ENSMUST00000174982 85 ntBASIC26.36■■□□□ 1.81
Retreg1dQ8VE91 AL845457.1-201ENSMUST00000197244 68 ntBASIC26.36■■□□□ 1.81
Retreg1dQ8VE91 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Retreg1dQ8VE91 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC26.35■■□□□ 1.81
Retreg1dQ8VE91 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC26.34■■□□□ 1.81
Retreg1dQ8VE91 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
Retreg1dQ8VE91 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Retreg1dQ8VE91 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC26.33■■□□□ 1.81
Retreg1dQ8VE91 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC26.33■■□□□ 1.8
Retreg1dQ8VE91 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Retreg1dQ8VE91 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Retreg1dQ8VE91 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC26.29■■□□□ 1.8
Retreg1dQ8VE91 Zfp131-207ENSMUST00000224946 1783 ntBASIC26.25■■□□□ 1.79
Retreg1dQ8VE91 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC26.23■■□□□ 1.79
Retreg1dQ8VE91 AC166822.3-201ENSMUST00000227394 661 ntBASIC26.23■■□□□ 1.79
Retreg1dQ8VE91 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
Retreg1dQ8VE91 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Retreg1dQ8VE91 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Retreg1dQ8VE91 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Retreg1dQ8VE91 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
Retreg1dQ8VE91 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC26.11■■□□□ 1.77
Retreg1dQ8VE91 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Retreg1dQ8VE91 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
Retreg1dQ8VE91 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC26.08■■□□□ 1.77
Retreg1dQ8VE91 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
Retreg1dQ8VE91 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Retreg1dQ8VE91 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Retreg1dQ8VE91 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
Retreg1dQ8VE91 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC25.97■■□□□ 1.75
Retreg1dQ8VE91 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
Retreg1dQ8VE91 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
Retreg1dQ8VE91 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
Retreg1dQ8VE91 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
Retreg1dQ8VE91 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC25.92■■□□□ 1.74
Retreg1dQ8VE91 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC25.91■■□□□ 1.74
Retreg1dQ8VE91 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
Retreg1dQ8VE91 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC25.89■■□□□ 1.73
Retreg1dQ8VE91 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
Retreg1dQ8VE91 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC25.8■■□□□ 1.72
Retreg1dQ8VE91 Mipep-204ENSMUST00000225043 1548 ntBASIC25.79■■□□□ 1.72
Retreg1dQ8VE91 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
Retreg1dQ8VE91 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
Retreg1dQ8VE91 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
Retreg1dQ8VE91 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
Retreg1dQ8VE91 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC25.76■■□□□ 1.71
Retreg1dQ8VE91 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC25.72■■□□□ 1.71
Retreg1dQ8VE91 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
Retreg1dQ8VE91 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC25.7■■□□□ 1.7
Retreg1dQ8VE91 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
Retreg1dQ8VE91 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
Retreg1dQ8VE91 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
Retreg1dQ8VE91 Zfp131-205ENSMUST00000223812 663 ntBASIC25.68■■□□□ 1.7
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms