Protein–RNA interactions for Protein: Q8VCH5

Rabepk, Rab9 effector protein with kelch motifs, mousemouse

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RabepkQ8VCH5 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC28.66■■■□□ 2.18
RabepkQ8VCH5 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
RabepkQ8VCH5 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC28.6■■■□□ 2.17
RabepkQ8VCH5 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
RabepkQ8VCH5 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
RabepkQ8VCH5 Zfp131-205ENSMUST00000223812 663 ntBASIC28.57■■■□□ 2.16
RabepkQ8VCH5 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC28.54■■■□□ 2.16
RabepkQ8VCH5 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC28.46■■■□□ 2.15
RabepkQ8VCH5 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
RabepkQ8VCH5 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC28.44■■■□□ 2.14
RabepkQ8VCH5 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC28.43■■■□□ 2.14
RabepkQ8VCH5 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
RabepkQ8VCH5 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC28.41■■■□□ 2.14
RabepkQ8VCH5 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
RabepkQ8VCH5 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
RabepkQ8VCH5 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
RabepkQ8VCH5 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
RabepkQ8VCH5 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC28.33■■■□□ 2.13
RabepkQ8VCH5 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
RabepkQ8VCH5 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC28.3■■■□□ 2.12
RabepkQ8VCH5 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
RabepkQ8VCH5 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
RabepkQ8VCH5 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
RabepkQ8VCH5 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
RabepkQ8VCH5 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
RabepkQ8VCH5 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC28.21■■■□□ 2.11
RabepkQ8VCH5 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
RabepkQ8VCH5 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
RabepkQ8VCH5 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC28.17■■■□□ 2.1
RabepkQ8VCH5 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
RabepkQ8VCH5 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
RabepkQ8VCH5 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
RabepkQ8VCH5 Gm42596-201ENSMUST00000196305 1958 ntBASIC28.05■■■□□ 2.08
RabepkQ8VCH5 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
RabepkQ8VCH5 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
RabepkQ8VCH5 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
RabepkQ8VCH5 AC166822.3-201ENSMUST00000227394 661 ntBASIC28.02■■■□□ 2.08
RabepkQ8VCH5 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC27.99■■■□□ 2.07
RabepkQ8VCH5 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
RabepkQ8VCH5 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC27.97■■■□□ 2.07
RabepkQ8VCH5 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
RabepkQ8VCH5 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC27.95■■■□□ 2.07
RabepkQ8VCH5 CT025624.2-201ENSMUST00000223609 1909 ntBASIC27.95■■■□□ 2.06
RabepkQ8VCH5 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC27.95■■■□□ 2.06
RabepkQ8VCH5 Gm10524-201ENSMUST00000181931 1893 ntBASIC27.94■■■□□ 2.06
RabepkQ8VCH5 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC27.89■■■□□ 2.06
RabepkQ8VCH5 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC27.82■■■□□ 2.04
RabepkQ8VCH5 AL845457.1-201ENSMUST00000197244 68 ntBASIC27.81■■■□□ 2.04
RabepkQ8VCH5 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC27.8■■■□□ 2.04
RabepkQ8VCH5 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC27.77■■■□□ 2.04
RabepkQ8VCH5 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
RabepkQ8VCH5 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC27.75■■■□□ 2.03
RabepkQ8VCH5 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC27.74■■■□□ 2.03
RabepkQ8VCH5 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
RabepkQ8VCH5 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC27.73■■■□□ 2.03
RabepkQ8VCH5 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
RabepkQ8VCH5 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
RabepkQ8VCH5 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC27.7■■■□□ 2.02
RabepkQ8VCH5 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.02
RabepkQ8VCH5 Gm16148-201ENSMUST00000119653 893 ntBASIC27.68■■■□□ 2.02
RabepkQ8VCH5 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC27.68■■■□□ 2.02
RabepkQ8VCH5 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC27.67■■■□□ 2.02
RabepkQ8VCH5 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC27.64■■■□□ 2.02
RabepkQ8VCH5 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC27.64■■■□□ 2.01
RabepkQ8VCH5 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC27.63■■■□□ 2.01
RabepkQ8VCH5 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC27.59■■■□□ 2.01
RabepkQ8VCH5 Tdp2-203ENSMUST00000223804 1136 ntBASIC27.59■■■□□ 2.01
RabepkQ8VCH5 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC27.58■■■□□ 2.01
RabepkQ8VCH5 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
RabepkQ8VCH5 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC27.56■■■□□ 2
RabepkQ8VCH5 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC27.55■■■□□ 2
RabepkQ8VCH5 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC27.55■■■□□ 2
RabepkQ8VCH5 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC27.53■■■□□ 2
RabepkQ8VCH5 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
RabepkQ8VCH5 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC27.5■■□□□ 1.99
RabepkQ8VCH5 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
RabepkQ8VCH5 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC27.47■■□□□ 1.99
RabepkQ8VCH5 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC27.47■■□□□ 1.99
RabepkQ8VCH5 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.99
RabepkQ8VCH5 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC27.45■■□□□ 1.98
RabepkQ8VCH5 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC27.43■■□□□ 1.98
RabepkQ8VCH5 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC27.39■■□□□ 1.98
RabepkQ8VCH5 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC27.39■■□□□ 1.98
RabepkQ8VCH5 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC27.39■■□□□ 1.98
RabepkQ8VCH5 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.97
RabepkQ8VCH5 Peli2-204ENSMUST00000226513 1320 ntBASIC27.38■■□□□ 1.97
RabepkQ8VCH5 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC27.37■■□□□ 1.97
RabepkQ8VCH5 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC27.34■■□□□ 1.97
RabepkQ8VCH5 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
RabepkQ8VCH5 Gm45855-201ENSMUST00000212546 880 ntBASIC27.3■■□□□ 1.96
RabepkQ8VCH5 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
RabepkQ8VCH5 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
RabepkQ8VCH5 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC27.26■■□□□ 1.96
RabepkQ8VCH5 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC27.26■■□□□ 1.95
RabepkQ8VCH5 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC27.26■■□□□ 1.95
RabepkQ8VCH5 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
RabepkQ8VCH5 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC27.24■■□□□ 1.95
RabepkQ8VCH5 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
RabepkQ8VCH5 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
RabepkQ8VCH5 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
Retrieved 100 of 76,532 protein–RNA pairs in 16.9 ms