Protein–RNA interactions for Protein: Q8VC56

Rnf8, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf8Q8VC56 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC26,09■■□□□ 1,77
Rnf8Q8VC56 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC26,08■■□□□ 1,77
Rnf8Q8VC56 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC26,05■■□□□ 1,76
Rnf8Q8VC56 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC26,04■■□□□ 1,76
Rnf8Q8VC56 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC26,04■■□□□ 1,76
Rnf8Q8VC56 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC26,02■■□□□ 1,76
Rnf8Q8VC56 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC26■■□□□ 1,75
Rnf8Q8VC56 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC26■■□□□ 1,75
Rnf8Q8VC56 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC25,99■■□□□ 1,75
Rnf8Q8VC56 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC25,99■■□□□ 1,75
Rnf8Q8VC56 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC25,97■■□□□ 1,75
Rnf8Q8VC56 Gm25262-201ENSMUST00000174934 133 ntBASIC25,97■■□□□ 1,75
Rnf8Q8VC56 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC25,95■■□□□ 1,74
Rnf8Q8VC56 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC25,88■■□□□ 1,73
Rnf8Q8VC56 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC25,87■■□□□ 1,73
Rnf8Q8VC56 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC25,84■■□□□ 1,73
Rnf8Q8VC56 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC25,83■■□□□ 1,73
Rnf8Q8VC56 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC25,82■■□□□ 1,72
Rnf8Q8VC56 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC25,82■■□□□ 1,72
Rnf8Q8VC56 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC25,75■■□□□ 1,71
Rnf8Q8VC56 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC25,75■■□□□ 1,71
Rnf8Q8VC56 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC25,74■■□□□ 1,71
Rnf8Q8VC56 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC25,72■■□□□ 1,71
Rnf8Q8VC56 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC25,72■■□□□ 1,71
Rnf8Q8VC56 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC25,72■■□□□ 1,71
Rnf8Q8VC56 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC25,71■■□□□ 1,71
Rnf8Q8VC56 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC25,7■■□□□ 1,7
Rnf8Q8VC56 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC25,67■■□□□ 1,7
Rnf8Q8VC56 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC25,65■■□□□ 1,7
Rnf8Q8VC56 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC25,65■■□□□ 1,7
Rnf8Q8VC56 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC25,62■■□□□ 1,69
Rnf8Q8VC56 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC25,59■■□□□ 1,69
Rnf8Q8VC56 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC25,59■■□□□ 1,69
Rnf8Q8VC56 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC25,58■■□□□ 1,69
Rnf8Q8VC56 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC25,55■■□□□ 1,68
Rnf8Q8VC56 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC25,54■■□□□ 1,68
Rnf8Q8VC56 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC25,5■■□□□ 1,67
Rnf8Q8VC56 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC25,5■■□□□ 1,67
Rnf8Q8VC56 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC25,5■■□□□ 1,67
Rnf8Q8VC56 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC25,48■■□□□ 1,67
Rnf8Q8VC56 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC25,47■■□□□ 1,67
Rnf8Q8VC56 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC25,47■■□□□ 1,67
Rnf8Q8VC56 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC25,46■■□□□ 1,67
Rnf8Q8VC56 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC25,45■■□□□ 1,66
Rnf8Q8VC56 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC25,41■■□□□ 1,66
Rnf8Q8VC56 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC25,4■■□□□ 1,66
Rnf8Q8VC56 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC25,39■■□□□ 1,66
Rnf8Q8VC56 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC25,39■■□□□ 1,65
Rnf8Q8VC56 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC25,38■■□□□ 1,65
Rnf8Q8VC56 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC25,35■■□□□ 1,65
Rnf8Q8VC56 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC25,33■■□□□ 1,65
Rnf8Q8VC56 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC25,33■■□□□ 1,65
Rnf8Q8VC56 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC25,32■■□□□ 1,64
Rnf8Q8VC56 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC25,31■■□□□ 1,64
Rnf8Q8VC56 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC25,31■■□□□ 1,64
Rnf8Q8VC56 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC25,31■■□□□ 1,64
Rnf8Q8VC56 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC25,3■■□□□ 1,64
Rnf8Q8VC56 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC25,28■■□□□ 1,64
Rnf8Q8VC56 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC25,27■■□□□ 1,64
Rnf8Q8VC56 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC25,27■■□□□ 1,64
Rnf8Q8VC56 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC25,27■■□□□ 1,64
Rnf8Q8VC56 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC25,23■■□□□ 1,63
Rnf8Q8VC56 Gm26115-201ENSMUST00000175605 87 ntBASIC25,22■■□□□ 1,63
Rnf8Q8VC56 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC25,21■■□□□ 1,63
Rnf8Q8VC56 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC25,21■■□□□ 1,63
Rnf8Q8VC56 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC25,2■■□□□ 1,62
Rnf8Q8VC56 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC25,2■■□□□ 1,62
Rnf8Q8VC56 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC25,19■■□□□ 1,62
Rnf8Q8VC56 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC25,18■■□□□ 1,62
Rnf8Q8VC56 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC25,17■■□□□ 1,62
Rnf8Q8VC56 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC25,15■■□□□ 1,62
Rnf8Q8VC56 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC25,15■■□□□ 1,62
Rnf8Q8VC56 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC25,13■■□□□ 1,61
Rnf8Q8VC56 Zfp131-207ENSMUST00000224946 1783 ntBASIC25,12■■□□□ 1,61
Rnf8Q8VC56 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC25,1■■□□□ 1,61
Rnf8Q8VC56 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC25,06■■□□□ 1,6
Rnf8Q8VC56 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC25,04■■□□□ 1,6
Rnf8Q8VC56 Gm17082-201ENSMUST00000166043 1091 ntBASIC25,02■■□□□ 1,6
Rnf8Q8VC56 Gm8109-201ENSMUST00000194076 746 ntBASIC25■■□□□ 1,59
Rnf8Q8VC56 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC25■■□□□ 1,59
Rnf8Q8VC56 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC24,98■■□□□ 1,59
Rnf8Q8VC56 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC24,97■■□□□ 1,59
Rnf8Q8VC56 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC24,96■■□□□ 1,59
Rnf8Q8VC56 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC24,93■■□□□ 1,58
Rnf8Q8VC56 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC24,93■■□□□ 1,58
Rnf8Q8VC56 Gm2415-204ENSMUST00000190235 2004 ntBASIC24,92■■□□□ 1,58
Rnf8Q8VC56 Gm27322-201ENSMUST00000184007 104 ntBASIC24,91■■□□□ 1,58
Rnf8Q8VC56 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC24,9■■□□□ 1,58
Rnf8Q8VC56 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC24,89■■□□□ 1,58
Rnf8Q8VC56 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC24,89■■□□□ 1,58
Rnf8Q8VC56 AC153504.1-201ENSMUST00000218379 2290 ntBASIC24,86■■□□□ 1,57
Rnf8Q8VC56 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC24,84■■□□□ 1,57
Rnf8Q8VC56 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC24,84■■□□□ 1,57
Rnf8Q8VC56 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC24,83■■□□□ 1,57
Rnf8Q8VC56 AL845457.1-201ENSMUST00000197244 68 ntBASIC24,83■■□□□ 1,57
Rnf8Q8VC56 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC24,81■■□□□ 1,56
Rnf8Q8VC56 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC24,8■■□□□ 1,56
Rnf8Q8VC56 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC24,79■■□□□ 1,56
Rnf8Q8VC56 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC24,79■■□□□ 1,56
Rnf8Q8VC56 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC24,79■■□□□ 1,56
Retrieved 100 of 76,532 protein–RNA pairs in 63,3 ms