Protein–RNA interactions for Protein: Q8R3I3

Cog6, Conserved oligomeric Golgi complex subunit 6, mousemouse

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cog6Q8R3I3 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC34■■■■□ 3.03
Cog6Q8R3I3 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC33.96■■■■□ 3.03
Cog6Q8R3I3 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC33.96■■■■□ 3.03
Cog6Q8R3I3 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC33.95■■■■□ 3.03
Cog6Q8R3I3 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC33.95■■■■□ 3.03
Cog6Q8R3I3 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC33.91■■■■□ 3.02
Cog6Q8R3I3 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC33.76■■■□□ 2.99
Cog6Q8R3I3 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC33.73■■■□□ 2.99
Cog6Q8R3I3 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC33.64■■■□□ 2.98
Cog6Q8R3I3 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC33.62■■■□□ 2.97
Cog6Q8R3I3 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC33.6■■■□□ 2.97
Cog6Q8R3I3 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC33.59■■■□□ 2.97
Cog6Q8R3I3 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC33.56■■■□□ 2.96
Cog6Q8R3I3 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC33.56■■■□□ 2.96
Cog6Q8R3I3 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC33.5■■■□□ 2.95
Cog6Q8R3I3 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC33.5■■■□□ 2.95
Cog6Q8R3I3 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC33.48■■■□□ 2.95
Cog6Q8R3I3 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC33.48■■■□□ 2.95
Cog6Q8R3I3 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC33.48■■■□□ 2.95
Cog6Q8R3I3 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC33.48■■■□□ 2.95
Cog6Q8R3I3 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC33.44■■■□□ 2.94
Cog6Q8R3I3 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC33.41■■■□□ 2.94
Cog6Q8R3I3 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC33.37■■■□□ 2.93
Cog6Q8R3I3 Rab21-202ENSMUST00000218831 843 ntBASIC33.34■■■□□ 2.93
Cog6Q8R3I3 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC33.31■■■□□ 2.92
Cog6Q8R3I3 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC33.29■■■□□ 2.92
Cog6Q8R3I3 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC33.26■■■□□ 2.91
Cog6Q8R3I3 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC33.25■■■□□ 2.91
Cog6Q8R3I3 Zfp131-207ENSMUST00000224946 1783 ntBASIC33.24■■■□□ 2.91
Cog6Q8R3I3 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC33.24■■■□□ 2.91
Cog6Q8R3I3 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC33.22■■■□□ 2.91
Cog6Q8R3I3 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC33.22■■■□□ 2.91
Cog6Q8R3I3 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC33.22■■■□□ 2.91
Cog6Q8R3I3 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC33.19■■■□□ 2.9
Cog6Q8R3I3 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC33.16■■■□□ 2.9
Cog6Q8R3I3 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC33.16■■■□□ 2.9
Cog6Q8R3I3 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC33.11■■■□□ 2.89
Cog6Q8R3I3 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC33.11■■■□□ 2.89
Cog6Q8R3I3 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC33.09■■■□□ 2.89
Cog6Q8R3I3 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC33.08■■■□□ 2.89
Cog6Q8R3I3 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC33.05■■■□□ 2.88
Cog6Q8R3I3 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC33.04■■■□□ 2.88
Cog6Q8R3I3 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC33.02■■■□□ 2.88
Cog6Q8R3I3 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC33.01■■■□□ 2.87
Cog6Q8R3I3 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC33■■■□□ 2.87
Cog6Q8R3I3 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC32.98■■■□□ 2.87
Cog6Q8R3I3 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC32.98■■■□□ 2.87
Cog6Q8R3I3 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC32.97■■■□□ 2.87
Cog6Q8R3I3 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC32.97■■■□□ 2.87
Cog6Q8R3I3 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC32.95■■■□□ 2.87
Cog6Q8R3I3 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC32.94■■■□□ 2.86
Cog6Q8R3I3 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC32.94■■■□□ 2.86
Cog6Q8R3I3 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC32.93■■■□□ 2.86
Cog6Q8R3I3 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC32.92■■■□□ 2.86
Cog6Q8R3I3 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC32.89■■■□□ 2.86
Cog6Q8R3I3 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC32.86■■■□□ 2.85
Cog6Q8R3I3 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC32.84■■■□□ 2.85
Cog6Q8R3I3 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC32.84■■■□□ 2.85
Cog6Q8R3I3 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC32.81■■■□□ 2.84
Cog6Q8R3I3 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC32.81■■■□□ 2.84
Cog6Q8R3I3 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC32.8■■■□□ 2.84
Cog6Q8R3I3 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC32.8■■■□□ 2.84
Cog6Q8R3I3 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC32.74■■■□□ 2.83
Cog6Q8R3I3 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC32.72■■■□□ 2.83
Cog6Q8R3I3 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC32.72■■■□□ 2.83
Cog6Q8R3I3 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC32.71■■■□□ 2.83
Cog6Q8R3I3 Gm2415-204ENSMUST00000190235 2004 ntBASIC32.7■■■□□ 2.83
Cog6Q8R3I3 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC32.64■■■□□ 2.82
Cog6Q8R3I3 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC32.64■■■□□ 2.82
Cog6Q8R3I3 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC32.61■■■□□ 2.81
Cog6Q8R3I3 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC32.59■■■□□ 2.81
Cog6Q8R3I3 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC32.59■■■□□ 2.81
Cog6Q8R3I3 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC32.56■■■□□ 2.8
Cog6Q8R3I3 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC32.56■■■□□ 2.8
Cog6Q8R3I3 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC32.55■■■□□ 2.8
Cog6Q8R3I3 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC32.54■■■□□ 2.8
Cog6Q8R3I3 Gm25262-201ENSMUST00000174934 133 ntBASIC32.52■■■□□ 2.8
Cog6Q8R3I3 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC32.47■■■□□ 2.79
Cog6Q8R3I3 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC32.44■■■□□ 2.78
Cog6Q8R3I3 Gm6658-202ENSMUST00000209493 1885 ntBASIC32.43■■■□□ 2.78
Cog6Q8R3I3 AL845457.1-201ENSMUST00000197244 68 ntBASIC32.4■■■□□ 2.78
Cog6Q8R3I3 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC32.4■■■□□ 2.78
Cog6Q8R3I3 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC32.29■■■□□ 2.76
Cog6Q8R3I3 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC32.29■■■□□ 2.76
Cog6Q8R3I3 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC32.27■■■□□ 2.76
Cog6Q8R3I3 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC32.27■■■□□ 2.76
Cog6Q8R3I3 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.75
Cog6Q8R3I3 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC32.25■■■□□ 2.75
Cog6Q8R3I3 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC32.24■■■□□ 2.75
Cog6Q8R3I3 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC32.23■■■□□ 2.75
Cog6Q8R3I3 Mipep-204ENSMUST00000225043 1548 ntBASIC32.23■■■□□ 2.75
Cog6Q8R3I3 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC32.22■■■□□ 2.75
Cog6Q8R3I3 AC153504.1-201ENSMUST00000218379 2290 ntBASIC32.19■■■□□ 2.74
Cog6Q8R3I3 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC32.18■■■□□ 2.74
Cog6Q8R3I3 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC32.18■■■□□ 2.74
Cog6Q8R3I3 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC32.18■■■□□ 2.74
Cog6Q8R3I3 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC32.17■■■□□ 2.74
Cog6Q8R3I3 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC32.15■■■□□ 2.74
Cog6Q8R3I3 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC32.13■■■□□ 2.73
Cog6Q8R3I3 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC32.12■■■□□ 2.73
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms