Protein–RNA interactions for Protein: Q8R326

Pspc1, Paraspeckle component 1, mousemouse

Known RBP Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pspc1Q8R326 Gm42596-201ENSMUST00000196305 1958 ntBASIC32.53■■■□□ 2.8
Pspc1Q8R326 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC32.49■■■□□ 2.79
Pspc1Q8R326 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC32.46■■■□□ 2.79
Pspc1Q8R326 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC32.44■■■□□ 2.78
Pspc1Q8R326 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC32.41■■■□□ 2.78
Pspc1Q8R326 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC32.4■■■□□ 2.78
Pspc1Q8R326 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC32.4■■■□□ 2.78
Pspc1Q8R326 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC32.38■■■□□ 2.77
Pspc1Q8R326 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC32.28■■■□□ 2.76
Pspc1Q8R326 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC32.27■■■□□ 2.76
Pspc1Q8R326 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC32.23■■■□□ 2.75
Pspc1Q8R326 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC32.22■■■□□ 2.75
Pspc1Q8R326 Gm17082-201ENSMUST00000166043 1091 ntBASIC32.22■■■□□ 2.75
Pspc1Q8R326 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC32.09■■■□□ 2.73
Pspc1Q8R326 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC32.05■■■□□ 2.72
Pspc1Q8R326 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC32.04■■■□□ 2.72
Pspc1Q8R326 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC32.03■■■□□ 2.72
Pspc1Q8R326 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
Pspc1Q8R326 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC32.01■■■□□ 2.72
Pspc1Q8R326 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC32.01■■■□□ 2.71
Pspc1Q8R326 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC32■■■□□ 2.71
Pspc1Q8R326 Gm27322-201ENSMUST00000184007 104 ntBASIC31.99■■■□□ 2.71
Pspc1Q8R326 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC31.9■■■□□ 2.7
Pspc1Q8R326 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC31.88■■■□□ 2.69
Pspc1Q8R326 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
Pspc1Q8R326 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
Pspc1Q8R326 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
Pspc1Q8R326 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
Pspc1Q8R326 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
Pspc1Q8R326 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
Pspc1Q8R326 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC31.7■■■□□ 2.67
Pspc1Q8R326 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.66
Pspc1Q8R326 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
Pspc1Q8R326 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC31.66■■■□□ 2.66
Pspc1Q8R326 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC31.63■■■□□ 2.65
Pspc1Q8R326 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC31.63■■■□□ 2.65
Pspc1Q8R326 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC31.62■■■□□ 2.65
Pspc1Q8R326 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
Pspc1Q8R326 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC31.61■■■□□ 2.65
Pspc1Q8R326 Gm24804-201ENSMUST00000174982 85 ntBASIC31.61■■■□□ 2.65
Pspc1Q8R326 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC31.57■■■□□ 2.64
Pspc1Q8R326 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC31.54■■■□□ 2.64
Pspc1Q8R326 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
Pspc1Q8R326 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
Pspc1Q8R326 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
Pspc1Q8R326 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
Pspc1Q8R326 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
Pspc1Q8R326 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC31.43■■■□□ 2.62
Pspc1Q8R326 AL845457.1-201ENSMUST00000197244 68 ntBASIC31.41■■■□□ 2.62
Pspc1Q8R326 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC31.39■■■□□ 2.61
Pspc1Q8R326 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC31.39■■■□□ 2.61
Pspc1Q8R326 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
Pspc1Q8R326 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
Pspc1Q8R326 AC166822.3-201ENSMUST00000227394 661 ntBASIC31.36■■■□□ 2.61
Pspc1Q8R326 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC31.35■■■□□ 2.61
Pspc1Q8R326 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC31.32■■■□□ 2.6
Pspc1Q8R326 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
Pspc1Q8R326 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
Pspc1Q8R326 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
Pspc1Q8R326 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
Pspc1Q8R326 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
Pspc1Q8R326 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
Pspc1Q8R326 Zfp131-207ENSMUST00000224946 1783 ntBASIC31.21■■■□□ 2.59
Pspc1Q8R326 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
Pspc1Q8R326 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
Pspc1Q8R326 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC31.13■■■□□ 2.57
Pspc1Q8R326 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
Pspc1Q8R326 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
Pspc1Q8R326 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
Pspc1Q8R326 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC31.08■■■□□ 2.57
Pspc1Q8R326 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
Pspc1Q8R326 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC31.03■■■□□ 2.56
Pspc1Q8R326 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC31.02■■■□□ 2.56
Pspc1Q8R326 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC31■■■□□ 2.55
Pspc1Q8R326 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
Pspc1Q8R326 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC30.98■■■□□ 2.55
Pspc1Q8R326 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC30.97■■■□□ 2.55
Pspc1Q8R326 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC30.93■■■□□ 2.54
Pspc1Q8R326 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
Pspc1Q8R326 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC30.92■■■□□ 2.54
Pspc1Q8R326 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
Pspc1Q8R326 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC30.91■■■□□ 2.54
Pspc1Q8R326 Zfp131-205ENSMUST00000223812 663 ntBASIC30.81■■■□□ 2.52
Pspc1Q8R326 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC30.81■■■□□ 2.52
Pspc1Q8R326 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC30.8■■■□□ 2.52
Pspc1Q8R326 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC30.77■■■□□ 2.52
Pspc1Q8R326 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
Pspc1Q8R326 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
Pspc1Q8R326 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC30.74■■■□□ 2.51
Pspc1Q8R326 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC30.72■■■□□ 2.51
Pspc1Q8R326 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC30.71■■■□□ 2.51
Pspc1Q8R326 Mipep-204ENSMUST00000225043 1548 ntBASIC30.7■■■□□ 2.51
Pspc1Q8R326 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
Pspc1Q8R326 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC30.68■■■□□ 2.5
Pspc1Q8R326 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC30.68■■■□□ 2.5
Pspc1Q8R326 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
Pspc1Q8R326 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
Pspc1Q8R326 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
Pspc1Q8R326 Peli2-204ENSMUST00000226513 1320 ntBASIC30.63■■■□□ 2.49
Pspc1Q8R326 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC30.62■■■□□ 2.49
Retrieved 100 of 76,532 protein–RNA pairs in 11.5 ms