Protein–RNA interactions for Protein: Q8R1J1

Tm6sf2, Transmembrane 6 superfamily member 2, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tm6sf2Q8R1J1 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC26.21■■□□□ 1.79
Tm6sf2Q8R1J1 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC26.2■■□□□ 1.78
Tm6sf2Q8R1J1 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Tm6sf2Q8R1J1 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC26.17■■□□□ 1.78
Tm6sf2Q8R1J1 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC26.16■■□□□ 1.78
Tm6sf2Q8R1J1 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Tm6sf2Q8R1J1 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
Tm6sf2Q8R1J1 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC26.14■■□□□ 1.78
Tm6sf2Q8R1J1 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC26.13■■□□□ 1.77
Tm6sf2Q8R1J1 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC26.13■■□□□ 1.77
Tm6sf2Q8R1J1 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
Tm6sf2Q8R1J1 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
Tm6sf2Q8R1J1 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC26.02■■□□□ 1.76
Tm6sf2Q8R1J1 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC25.99■■□□□ 1.75
Tm6sf2Q8R1J1 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
Tm6sf2Q8R1J1 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC25.97■■□□□ 1.75
Tm6sf2Q8R1J1 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC25.95■■□□□ 1.74
Tm6sf2Q8R1J1 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
Tm6sf2Q8R1J1 Gm26115-201ENSMUST00000175605 87 ntBASIC25.92■■□□□ 1.74
Tm6sf2Q8R1J1 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Tm6sf2Q8R1J1 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
Tm6sf2Q8R1J1 Gm8109-201ENSMUST00000194076 746 ntBASIC25.84■■□□□ 1.73
Tm6sf2Q8R1J1 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
Tm6sf2Q8R1J1 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.72
Tm6sf2Q8R1J1 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
Tm6sf2Q8R1J1 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
Tm6sf2Q8R1J1 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
Tm6sf2Q8R1J1 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC25.79■■□□□ 1.72
Tm6sf2Q8R1J1 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC25.75■■□□□ 1.71
Tm6sf2Q8R1J1 Gm17082-201ENSMUST00000166043 1091 ntBASIC25.74■■□□□ 1.71
Tm6sf2Q8R1J1 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
Tm6sf2Q8R1J1 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
Tm6sf2Q8R1J1 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
Tm6sf2Q8R1J1 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC25.66■■□□□ 1.7
Tm6sf2Q8R1J1 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Tm6sf2Q8R1J1 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC25.65■■□□□ 1.7
Tm6sf2Q8R1J1 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
Tm6sf2Q8R1J1 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC25.63■■□□□ 1.69
Tm6sf2Q8R1J1 Gm27322-201ENSMUST00000184007 104 ntBASIC25.61■■□□□ 1.69
Tm6sf2Q8R1J1 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC25.6■■□□□ 1.69
Tm6sf2Q8R1J1 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
Tm6sf2Q8R1J1 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Tm6sf2Q8R1J1 Zfp131-207ENSMUST00000224946 1783 ntBASIC25.54■■□□□ 1.68
Tm6sf2Q8R1J1 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC25.53■■□□□ 1.68
Tm6sf2Q8R1J1 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC25.5■■□□□ 1.67
Tm6sf2Q8R1J1 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC25.48■■□□□ 1.67
Tm6sf2Q8R1J1 AL845457.1-201ENSMUST00000197244 68 ntBASIC25.47■■□□□ 1.67
Tm6sf2Q8R1J1 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
Tm6sf2Q8R1J1 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC25.46■■□□□ 1.67
Tm6sf2Q8R1J1 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
Tm6sf2Q8R1J1 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Tm6sf2Q8R1J1 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
Tm6sf2Q8R1J1 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC25.33■■□□□ 1.64
Tm6sf2Q8R1J1 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Tm6sf2Q8R1J1 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Tm6sf2Q8R1J1 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Tm6sf2Q8R1J1 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Tm6sf2Q8R1J1 AC166822.3-201ENSMUST00000227394 661 ntBASIC25.26■■□□□ 1.63
Tm6sf2Q8R1J1 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC25.25■■□□□ 1.63
Tm6sf2Q8R1J1 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
Tm6sf2Q8R1J1 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC25.24■■□□□ 1.63
Tm6sf2Q8R1J1 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Tm6sf2Q8R1J1 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Tm6sf2Q8R1J1 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC25.2■■□□□ 1.62
Tm6sf2Q8R1J1 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC25.19■■□□□ 1.62
Tm6sf2Q8R1J1 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Tm6sf2Q8R1J1 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Tm6sf2Q8R1J1 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
Tm6sf2Q8R1J1 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Tm6sf2Q8R1J1 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC25.11■■□□□ 1.61
Tm6sf2Q8R1J1 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Tm6sf2Q8R1J1 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Tm6sf2Q8R1J1 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Tm6sf2Q8R1J1 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
Tm6sf2Q8R1J1 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC25.07■■□□□ 1.6
Tm6sf2Q8R1J1 Mipep-204ENSMUST00000225043 1548 ntBASIC25.04■■□□□ 1.6
Tm6sf2Q8R1J1 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
Tm6sf2Q8R1J1 Gm24804-201ENSMUST00000174982 85 ntBASIC25.02■■□□□ 1.6
Tm6sf2Q8R1J1 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC25■■□□□ 1.59
Tm6sf2Q8R1J1 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
Tm6sf2Q8R1J1 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Tm6sf2Q8R1J1 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC24.95■■□□□ 1.59
Tm6sf2Q8R1J1 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
Tm6sf2Q8R1J1 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
Tm6sf2Q8R1J1 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
Tm6sf2Q8R1J1 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Tm6sf2Q8R1J1 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC24.91■■□□□ 1.58
Tm6sf2Q8R1J1 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
Tm6sf2Q8R1J1 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Tm6sf2Q8R1J1 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
Tm6sf2Q8R1J1 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC24.85■■□□□ 1.57
Tm6sf2Q8R1J1 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
Tm6sf2Q8R1J1 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
Tm6sf2Q8R1J1 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
Tm6sf2Q8R1J1 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC24.83■■□□□ 1.57
Tm6sf2Q8R1J1 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
Tm6sf2Q8R1J1 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC24.76■■□□□ 1.55
Tm6sf2Q8R1J1 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
Tm6sf2Q8R1J1 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Tm6sf2Q8R1J1 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
Retrieved 100 of 76,532 protein–RNA pairs in 8.4 ms