Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC34.01■■■■□ 3.04
Sf3a1Q8K4Z5 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC34.01■■■■□ 3.03
Sf3a1Q8K4Z5 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC34■■■■□ 3.03
Sf3a1Q8K4Z5 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC33.98■■■■□ 3.03
Sf3a1Q8K4Z5 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC33.96■■■■□ 3.03
Sf3a1Q8K4Z5 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC33.94■■■■□ 3.02
Sf3a1Q8K4Z5 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC33.92■■■■□ 3.02
Sf3a1Q8K4Z5 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC33.87■■■■□ 3.01
Sf3a1Q8K4Z5 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC33.86■■■■□ 3.01
Sf3a1Q8K4Z5 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC33.85■■■■□ 3.01
Sf3a1Q8K4Z5 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC33.84■■■■□ 3.01
Sf3a1Q8K4Z5 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC33.83■■■■□ 3.01
Sf3a1Q8K4Z5 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC33.82■■■■□ 3
Sf3a1Q8K4Z5 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC33.77■■■■□ 3
Sf3a1Q8K4Z5 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC33.76■■■□□ 2.99
Sf3a1Q8K4Z5 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC33.72■■■□□ 2.99
Sf3a1Q8K4Z5 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC33.72■■■□□ 2.99
Sf3a1Q8K4Z5 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC33.69■■■□□ 2.98
Sf3a1Q8K4Z5 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC33.63■■■□□ 2.97
Sf3a1Q8K4Z5 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC33.63■■■□□ 2.97
Sf3a1Q8K4Z5 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC33.57■■■□□ 2.97
Sf3a1Q8K4Z5 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC33.53■■■□□ 2.96
Sf3a1Q8K4Z5 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC33.53■■■□□ 2.96
Sf3a1Q8K4Z5 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC33.46■■■□□ 2.95
Sf3a1Q8K4Z5 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC33.45■■■□□ 2.95
Sf3a1Q8K4Z5 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC33.45■■■□□ 2.95
Sf3a1Q8K4Z5 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC33.45■■■□□ 2.95
Sf3a1Q8K4Z5 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC33.45■■■□□ 2.95
Sf3a1Q8K4Z5 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC33.43■■■□□ 2.94
Sf3a1Q8K4Z5 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC33.37■■■□□ 2.93
Sf3a1Q8K4Z5 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC33.33■■■□□ 2.93
Sf3a1Q8K4Z5 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC33.3■■■□□ 2.92
Sf3a1Q8K4Z5 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC33.3■■■□□ 2.92
Sf3a1Q8K4Z5 Zfp131-207ENSMUST00000224946 1783 ntBASIC33.29■■■□□ 2.92
Sf3a1Q8K4Z5 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC33.28■■■□□ 2.92
Sf3a1Q8K4Z5 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC33.26■■■□□ 2.92
Sf3a1Q8K4Z5 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC33.23■■■□□ 2.91
Sf3a1Q8K4Z5 Gm26115-201ENSMUST00000175605 87 ntBASIC33.18■■■□□ 2.9
Sf3a1Q8K4Z5 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC33.15■■■□□ 2.9
Sf3a1Q8K4Z5 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC33.15■■■□□ 2.9
Sf3a1Q8K4Z5 Gm17082-201ENSMUST00000166043 1091 ntBASIC33.14■■■□□ 2.9
Sf3a1Q8K4Z5 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC33.12■■■□□ 2.89
Sf3a1Q8K4Z5 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC33.11■■■□□ 2.89
Sf3a1Q8K4Z5 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC33.09■■■□□ 2.89
Sf3a1Q8K4Z5 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC33.08■■■□□ 2.89
Sf3a1Q8K4Z5 Gm8109-201ENSMUST00000194076 746 ntBASIC33.07■■■□□ 2.88
Sf3a1Q8K4Z5 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC33.06■■■□□ 2.88
Sf3a1Q8K4Z5 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC33.05■■■□□ 2.88
Sf3a1Q8K4Z5 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC33.04■■■□□ 2.88
Sf3a1Q8K4Z5 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC33.02■■■□□ 2.88
Sf3a1Q8K4Z5 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC33.02■■■□□ 2.88
Sf3a1Q8K4Z5 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC32.98■■■□□ 2.87
Sf3a1Q8K4Z5 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC32.98■■■□□ 2.87
Sf3a1Q8K4Z5 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC32.97■■■□□ 2.87
Sf3a1Q8K4Z5 AL845457.1-201ENSMUST00000197244 68 ntBASIC32.97■■■□□ 2.87
Sf3a1Q8K4Z5 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC32.97■■■□□ 2.87
Sf3a1Q8K4Z5 Gm27322-201ENSMUST00000184007 104 ntBASIC32.96■■■□□ 2.87
Sf3a1Q8K4Z5 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC32.94■■■□□ 2.86
Sf3a1Q8K4Z5 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC32.93■■■□□ 2.86
Sf3a1Q8K4Z5 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC32.93■■■□□ 2.86
Sf3a1Q8K4Z5 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC32.92■■■□□ 2.86
Sf3a1Q8K4Z5 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC32.91■■■□□ 2.86
Sf3a1Q8K4Z5 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC32.85■■■□□ 2.85
Sf3a1Q8K4Z5 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC32.83■■■□□ 2.85
Sf3a1Q8K4Z5 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC32.82■■■□□ 2.84
Sf3a1Q8K4Z5 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC32.78■■■□□ 2.84
Sf3a1Q8K4Z5 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC32.77■■■□□ 2.84
Sf3a1Q8K4Z5 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC32.71■■■□□ 2.83
Sf3a1Q8K4Z5 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC32.68■■■□□ 2.82
Sf3a1Q8K4Z5 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC32.68■■■□□ 2.82
Sf3a1Q8K4Z5 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC32.66■■■□□ 2.82
Sf3a1Q8K4Z5 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC32.66■■■□□ 2.82
Sf3a1Q8K4Z5 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC32.64■■■□□ 2.82
Sf3a1Q8K4Z5 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC32.63■■■□□ 2.81
Sf3a1Q8K4Z5 AC166822.3-201ENSMUST00000227394 661 ntBASIC32.6■■■□□ 2.81
Sf3a1Q8K4Z5 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC32.55■■■□□ 2.8
Sf3a1Q8K4Z5 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC32.54■■■□□ 2.8
Sf3a1Q8K4Z5 Mipep-204ENSMUST00000225043 1548 ntBASIC32.51■■■□□ 2.79
Sf3a1Q8K4Z5 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC32.49■■■□□ 2.79
Sf3a1Q8K4Z5 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC32.47■■■□□ 2.79
Sf3a1Q8K4Z5 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC32.46■■■□□ 2.79
Sf3a1Q8K4Z5 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC32.46■■■□□ 2.79
Sf3a1Q8K4Z5 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC32.45■■■□□ 2.78
Sf3a1Q8K4Z5 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC32.41■■■□□ 2.78
Sf3a1Q8K4Z5 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC32.41■■■□□ 2.78
Sf3a1Q8K4Z5 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC32.38■■■□□ 2.77
Sf3a1Q8K4Z5 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC32.38■■■□□ 2.77
Sf3a1Q8K4Z5 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC32.36■■■□□ 2.77
Sf3a1Q8K4Z5 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC32.34■■■□□ 2.77
Sf3a1Q8K4Z5 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC32.33■■■□□ 2.77
Sf3a1Q8K4Z5 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC32.32■■■□□ 2.76
Sf3a1Q8K4Z5 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC32.31■■■□□ 2.76
Sf3a1Q8K4Z5 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC32.29■■■□□ 2.76
Sf3a1Q8K4Z5 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC32.26■■■□□ 2.75
Sf3a1Q8K4Z5 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC32.25■■■□□ 2.75
Sf3a1Q8K4Z5 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC32.24■■■□□ 2.75
Sf3a1Q8K4Z5 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC32.23■■■□□ 2.75
Sf3a1Q8K4Z5 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC32.22■■■□□ 2.75
Sf3a1Q8K4Z5 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC32.19■■■□□ 2.74
Sf3a1Q8K4Z5 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC32.14■■■□□ 2.74
Retrieved 100 of 76,532 protein–RNA pairs in 13.3 ms