Protein–RNA interactions for Protein: Q8K4G2

Col23a1, Collagen alpha-1(XXIII) chain, mousemouse

Predictions only

Length 532 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col23a1Q8K4G2 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC35,7■■■■□ 3,31
Col23a1Q8K4G2 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC35,63■■■■□ 3,29
Col23a1Q8K4G2 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC35,6■■■■□ 3,29
Col23a1Q8K4G2 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC35,56■■■■□ 3,28
Col23a1Q8K4G2 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC35,5■■■■□ 3,27
Col23a1Q8K4G2 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC35,49■■■■□ 3,27
Col23a1Q8K4G2 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC35,48■■■■□ 3,27
Col23a1Q8K4G2 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC35,48■■■■□ 3,27
Col23a1Q8K4G2 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC35,47■■■■□ 3,27
Col23a1Q8K4G2 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC35,44■■■■□ 3,26
Col23a1Q8K4G2 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC35,43■■■■□ 3,26
Col23a1Q8K4G2 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC35,4■■■■□ 3,26
Col23a1Q8K4G2 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC35,34■■■■□ 3,25
Col23a1Q8K4G2 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC35,33■■■■□ 3,25
Col23a1Q8K4G2 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC35,32■■■■□ 3,24
Col23a1Q8K4G2 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC35,32■■■■□ 3,24
Col23a1Q8K4G2 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC35,28■■■■□ 3,24
Col23a1Q8K4G2 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC35,27■■■■□ 3,24
Col23a1Q8K4G2 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC35,27■■■■□ 3,24
Col23a1Q8K4G2 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC35,25■■■■□ 3,23
Col23a1Q8K4G2 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC35,24■■■■□ 3,23
Col23a1Q8K4G2 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC35,22■■■■□ 3,23
Col23a1Q8K4G2 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC35,2■■■■□ 3,23
Col23a1Q8K4G2 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC35,2■■■■□ 3,23
Col23a1Q8K4G2 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC35,17■■■■□ 3,22
Col23a1Q8K4G2 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC35,16■■■■□ 3,22
Col23a1Q8K4G2 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC35,06■■■■□ 3,2
Col23a1Q8K4G2 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC35,04■■■■□ 3,2
Col23a1Q8K4G2 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC35,03■■■■□ 3,2
Col23a1Q8K4G2 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC35,02■■■■□ 3,2
Col23a1Q8K4G2 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC35,01■■■■□ 3,2
Col23a1Q8K4G2 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC34,97■■■■□ 3,19
Col23a1Q8K4G2 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC34,95■■■■□ 3,19
Col23a1Q8K4G2 AC166822.3-201ENSMUST00000227394 661 ntBASIC34,91■■■■□ 3,18
Col23a1Q8K4G2 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC34,88■■■■□ 3,17
Col23a1Q8K4G2 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC34,87■■■■□ 3,17
Col23a1Q8K4G2 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC34,86■■■■□ 3,17
Col23a1Q8K4G2 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC34,78■■■■□ 3,16
Col23a1Q8K4G2 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC34,74■■■■□ 3,15
Col23a1Q8K4G2 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC34,72■■■■□ 3,15
Col23a1Q8K4G2 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC34,7■■■■□ 3,15
Col23a1Q8K4G2 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC34,7■■■■□ 3,15
Col23a1Q8K4G2 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC34,69■■■■□ 3,14
Col23a1Q8K4G2 Gm42596-201ENSMUST00000196305 1958 ntBASIC34,66■■■■□ 3,14
Col23a1Q8K4G2 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC34,65■■■■□ 3,14
Col23a1Q8K4G2 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC34,63■■■■□ 3,13
Col23a1Q8K4G2 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC34,59■■■■□ 3,13
Col23a1Q8K4G2 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC34,57■■■■□ 3,12
Col23a1Q8K4G2 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC34,57■■■■□ 3,12
Col23a1Q8K4G2 AL845457.1-201ENSMUST00000197244 68 ntBASIC34,56■■■■□ 3,12
Col23a1Q8K4G2 Gm16148-201ENSMUST00000119653 893 ntBASIC34,55■■■■□ 3,12
Col23a1Q8K4G2 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC34,55■■■■□ 3,12
Col23a1Q8K4G2 CT025624.2-201ENSMUST00000223609 1909 ntBASIC34,53■■■■□ 3,12
Col23a1Q8K4G2 Tdp2-203ENSMUST00000223804 1136 ntBASIC34,52■■■■□ 3,12
Col23a1Q8K4G2 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC34,52■■■■□ 3,12
Col23a1Q8K4G2 Gm10524-201ENSMUST00000181931 1893 ntBASIC34,51■■■■□ 3,12
Col23a1Q8K4G2 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC34,5■■■■□ 3,11
Col23a1Q8K4G2 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC34,47■■■■□ 3,11
Col23a1Q8K4G2 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC34,45■■■■□ 3,11
Col23a1Q8K4G2 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC34,39■■■■□ 3,1
Col23a1Q8K4G2 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC34,39■■■■□ 3,1
Col23a1Q8K4G2 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC34,39■■■■□ 3,1
Col23a1Q8K4G2 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC34,37■■■■□ 3,09
Col23a1Q8K4G2 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC34,36■■■■□ 3,09
Col23a1Q8K4G2 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC34,34■■■■□ 3,09
Col23a1Q8K4G2 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC34,33■■■■□ 3,09
Col23a1Q8K4G2 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC34,33■■■■□ 3,09
Col23a1Q8K4G2 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC34,3■■■■□ 3,08
Col23a1Q8K4G2 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC34,29■■■■□ 3,08
Col23a1Q8K4G2 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC34,27■■■■□ 3,08
Col23a1Q8K4G2 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC34,27■■■■□ 3,08
Col23a1Q8K4G2 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC34,26■■■■□ 3,08
Col23a1Q8K4G2 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC34,26■■■■□ 3,08
Col23a1Q8K4G2 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC34,25■■■■□ 3,07
Col23a1Q8K4G2 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC34,25■■■■□ 3,07
Col23a1Q8K4G2 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC34,24■■■■□ 3,07
Col23a1Q8K4G2 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC34,22■■■■□ 3,07
Col23a1Q8K4G2 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC34,2■■■■□ 3,07
Col23a1Q8K4G2 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC34,19■■■■□ 3,06
Col23a1Q8K4G2 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC34,17■■■■□ 3,06
Col23a1Q8K4G2 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC34,13■■■■□ 3,05
Col23a1Q8K4G2 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC34,12■■■■□ 3,05
Col23a1Q8K4G2 Peli2-204ENSMUST00000226513 1320 ntBASIC34,1■■■■□ 3,05
Col23a1Q8K4G2 Gm45855-201ENSMUST00000212546 880 ntBASIC34,1■■■■□ 3,05
Col23a1Q8K4G2 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC34,1■■■■□ 3,05
Col23a1Q8K4G2 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC34,09■■■■□ 3,05
Col23a1Q8K4G2 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC34,06■■■■□ 3,04
Col23a1Q8K4G2 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC34,06■■■■□ 3,04
Col23a1Q8K4G2 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC34,06■■■■□ 3,04
Col23a1Q8K4G2 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC34,03■■■■□ 3,04
Col23a1Q8K4G2 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC34,01■■■■□ 3,04
Col23a1Q8K4G2 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC34■■■■□ 3,03
Col23a1Q8K4G2 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC33,98■■■■□ 3,03
Col23a1Q8K4G2 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC33,95■■■■□ 3,03
Col23a1Q8K4G2 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC33,94■■■■□ 3,02
Col23a1Q8K4G2 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC33,93■■■■□ 3,02
Col23a1Q8K4G2 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC33,93■■■■□ 3,02
Col23a1Q8K4G2 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC33,9■■■■□ 3,02
Col23a1Q8K4G2 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC33,88■■■■□ 3,01
Col23a1Q8K4G2 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC33,86■■■■□ 3,01
Retrieved 100 of 76,532 protein–RNA pairs in 12,3 ms