Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC26.09■■□□□ 1.77
Clrn1Q8K445 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC26.09■■□□□ 1.77
Clrn1Q8K445 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC26.08■■□□□ 1.77
Clrn1Q8K445 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC26.01■■□□□ 1.75
Clrn1Q8K445 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
Clrn1Q8K445 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC25.96■■□□□ 1.75
Clrn1Q8K445 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
Clrn1Q8K445 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
Clrn1Q8K445 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
Clrn1Q8K445 Gm25262-201ENSMUST00000174934 133 ntBASIC25.91■■□□□ 1.74
Clrn1Q8K445 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Clrn1Q8K445 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC25.86■■□□□ 1.73
Clrn1Q8K445 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC25.84■■□□□ 1.73
Clrn1Q8K445 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC25.82■■□□□ 1.72
Clrn1Q8K445 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC25.81■■□□□ 1.72
Clrn1Q8K445 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
Clrn1Q8K445 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
Clrn1Q8K445 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC25.74■■□□□ 1.71
Clrn1Q8K445 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
Clrn1Q8K445 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC25.74■■□□□ 1.71
Clrn1Q8K445 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
Clrn1Q8K445 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC25.71■■□□□ 1.71
Clrn1Q8K445 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
Clrn1Q8K445 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
Clrn1Q8K445 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
Clrn1Q8K445 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
Clrn1Q8K445 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Clrn1Q8K445 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
Clrn1Q8K445 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
Clrn1Q8K445 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC25.59■■□□□ 1.69
Clrn1Q8K445 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC25.59■■□□□ 1.69
Clrn1Q8K445 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC25.56■■□□□ 1.68
Clrn1Q8K445 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Clrn1Q8K445 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC25.54■■□□□ 1.68
Clrn1Q8K445 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Clrn1Q8K445 Zfp131-207ENSMUST00000224946 1783 ntBASIC25.51■■□□□ 1.67
Clrn1Q8K445 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
Clrn1Q8K445 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Clrn1Q8K445 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC25.42■■□□□ 1.66
Clrn1Q8K445 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC25.41■■□□□ 1.66
Clrn1Q8K445 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Clrn1Q8K445 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC25.37■■□□□ 1.65
Clrn1Q8K445 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC25.37■■□□□ 1.65
Clrn1Q8K445 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC25.35■■□□□ 1.65
Clrn1Q8K445 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
Clrn1Q8K445 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC25.32■■□□□ 1.64
Clrn1Q8K445 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Clrn1Q8K445 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
Clrn1Q8K445 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Clrn1Q8K445 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC25.26■■□□□ 1.63
Clrn1Q8K445 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Clrn1Q8K445 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
Clrn1Q8K445 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Clrn1Q8K445 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC25.21■■□□□ 1.63
Clrn1Q8K445 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
Clrn1Q8K445 AL845457.1-201ENSMUST00000197244 68 ntBASIC25.19■■□□□ 1.62
Clrn1Q8K445 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
Clrn1Q8K445 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Clrn1Q8K445 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Clrn1Q8K445 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC25.13■■□□□ 1.61
Clrn1Q8K445 Gm17082-201ENSMUST00000166043 1091 ntBASIC25.13■■□□□ 1.61
Clrn1Q8K445 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
Clrn1Q8K445 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
Clrn1Q8K445 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
Clrn1Q8K445 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Clrn1Q8K445 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Clrn1Q8K445 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC25.09■■□□□ 1.61
Clrn1Q8K445 Gm26115-201ENSMUST00000175605 87 ntBASIC25.09■■□□□ 1.61
Clrn1Q8K445 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC25.08■■□□□ 1.61
Clrn1Q8K445 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC25.08■■□□□ 1.61
Clrn1Q8K445 Gm27322-201ENSMUST00000184007 104 ntBASIC25.07■■□□□ 1.6
Clrn1Q8K445 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC25.06■■□□□ 1.6
Clrn1Q8K445 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC25.03■■□□□ 1.6
Clrn1Q8K445 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
Clrn1Q8K445 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Clrn1Q8K445 Gm8109-201ENSMUST00000194076 746 ntBASIC25.01■■□□□ 1.59
Clrn1Q8K445 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC25■■□□□ 1.59
Clrn1Q8K445 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC24.99■■□□□ 1.59
Clrn1Q8K445 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC24.98■■□□□ 1.59
Clrn1Q8K445 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC24.97■■□□□ 1.59
Clrn1Q8K445 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
Clrn1Q8K445 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC24.91■■□□□ 1.58
Clrn1Q8K445 Mipep-204ENSMUST00000225043 1548 ntBASIC24.9■■□□□ 1.58
Clrn1Q8K445 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC24.86■■□□□ 1.57
Clrn1Q8K445 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC24.85■■□□□ 1.57
Clrn1Q8K445 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC24.85■■□□□ 1.57
Clrn1Q8K445 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
Clrn1Q8K445 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
Clrn1Q8K445 AC166822.3-201ENSMUST00000227394 661 ntBASIC24.83■■□□□ 1.57
Clrn1Q8K445 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC24.83■■□□□ 1.57
Clrn1Q8K445 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC24.83■■□□□ 1.56
Clrn1Q8K445 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Clrn1Q8K445 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC24.78■■□□□ 1.56
Clrn1Q8K445 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC24.78■■□□□ 1.56
Clrn1Q8K445 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
Clrn1Q8K445 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
Clrn1Q8K445 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC24.72■■□□□ 1.55
Clrn1Q8K445 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC24.69■■□□□ 1.54
Clrn1Q8K445 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC24.69■■□□□ 1.54
Clrn1Q8K445 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms