Protein–RNA interactions for Protein: Q8K1X4

Nckap1l, Nck-associated protein 1-like, mousemouse

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nckap1lQ8K1X4 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC26.52■■□□□ 1.84
Nckap1lQ8K1X4 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
Nckap1lQ8K1X4 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
Nckap1lQ8K1X4 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
Nckap1lQ8K1X4 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC26.48■■□□□ 1.83
Nckap1lQ8K1X4 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC26.46■■□□□ 1.83
Nckap1lQ8K1X4 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC26.46■■□□□ 1.83
Nckap1lQ8K1X4 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Nckap1lQ8K1X4 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Nckap1lQ8K1X4 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
Nckap1lQ8K1X4 Rab21-202ENSMUST00000218831 843 ntBASIC26.36■■□□□ 1.81
Nckap1lQ8K1X4 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC26.36■■□□□ 1.81
Nckap1lQ8K1X4 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC26.35■■□□□ 1.81
Nckap1lQ8K1X4 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC26.34■■□□□ 1.81
Nckap1lQ8K1X4 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC26.29■■□□□ 1.8
Nckap1lQ8K1X4 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC26.29■■□□□ 1.8
Nckap1lQ8K1X4 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Nckap1lQ8K1X4 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Nckap1lQ8K1X4 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Nckap1lQ8K1X4 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC26.23■■□□□ 1.79
Nckap1lQ8K1X4 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC26.21■■□□□ 1.79
Nckap1lQ8K1X4 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC26.18■■□□□ 1.78
Nckap1lQ8K1X4 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Nckap1lQ8K1X4 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC26.14■■□□□ 1.78
Nckap1lQ8K1X4 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC26.11■■□□□ 1.77
Nckap1lQ8K1X4 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
Nckap1lQ8K1X4 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
Nckap1lQ8K1X4 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Nckap1lQ8K1X4 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Nckap1lQ8K1X4 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
Nckap1lQ8K1X4 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC26■■□□□ 1.75
Nckap1lQ8K1X4 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC25.98■■□□□ 1.75
Nckap1lQ8K1X4 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
Nckap1lQ8K1X4 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC25.97■■□□□ 1.75
Nckap1lQ8K1X4 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC25.96■■□□□ 1.75
Nckap1lQ8K1X4 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC25.94■■□□□ 1.74
Nckap1lQ8K1X4 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
Nckap1lQ8K1X4 Gm25262-201ENSMUST00000174934 133 ntBASIC25.93■■□□□ 1.74
Nckap1lQ8K1X4 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
Nckap1lQ8K1X4 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
Nckap1lQ8K1X4 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
Nckap1lQ8K1X4 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC25.89■■□□□ 1.73
Nckap1lQ8K1X4 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC25.87■■□□□ 1.73
Nckap1lQ8K1X4 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
Nckap1lQ8K1X4 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC25.86■■□□□ 1.73
Nckap1lQ8K1X4 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
Nckap1lQ8K1X4 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC25.85■■□□□ 1.73
Nckap1lQ8K1X4 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC25.84■■□□□ 1.73
Nckap1lQ8K1X4 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
Nckap1lQ8K1X4 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC25.84■■□□□ 1.73
Nckap1lQ8K1X4 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
Nckap1lQ8K1X4 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC25.83■■□□□ 1.73
Nckap1lQ8K1X4 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC25.82■■□□□ 1.72
Nckap1lQ8K1X4 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC25.81■■□□□ 1.72
Nckap1lQ8K1X4 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
Nckap1lQ8K1X4 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC25.77■■□□□ 1.72
Nckap1lQ8K1X4 Zfp131-207ENSMUST00000224946 1783 ntBASIC25.77■■□□□ 1.72
Nckap1lQ8K1X4 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC25.75■■□□□ 1.71
Nckap1lQ8K1X4 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
Nckap1lQ8K1X4 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
Nckap1lQ8K1X4 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
Nckap1lQ8K1X4 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
Nckap1lQ8K1X4 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
Nckap1lQ8K1X4 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC25.56■■□□□ 1.68
Nckap1lQ8K1X4 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
Nckap1lQ8K1X4 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Nckap1lQ8K1X4 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Nckap1lQ8K1X4 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC25.49■■□□□ 1.67
Nckap1lQ8K1X4 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC25.43■■□□□ 1.66
Nckap1lQ8K1X4 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC25.43■■□□□ 1.66
Nckap1lQ8K1X4 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC25.43■■□□□ 1.66
Nckap1lQ8K1X4 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC25.41■■□□□ 1.66
Nckap1lQ8K1X4 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC25.4■■□□□ 1.66
Nckap1lQ8K1X4 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
Nckap1lQ8K1X4 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Nckap1lQ8K1X4 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC25.39■■□□□ 1.65
Nckap1lQ8K1X4 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
Nckap1lQ8K1X4 AL845457.1-201ENSMUST00000197244 68 ntBASIC25.36■■□□□ 1.65
Nckap1lQ8K1X4 AC153504.1-201ENSMUST00000218379 2290 ntBASIC25.36■■□□□ 1.65
Nckap1lQ8K1X4 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
Nckap1lQ8K1X4 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC25.33■■□□□ 1.65
Nckap1lQ8K1X4 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.64
Nckap1lQ8K1X4 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC25.28■■□□□ 1.64
Nckap1lQ8K1X4 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Nckap1lQ8K1X4 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Nckap1lQ8K1X4 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Nckap1lQ8K1X4 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Nckap1lQ8K1X4 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC25.25■■□□□ 1.63
Nckap1lQ8K1X4 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Nckap1lQ8K1X4 Gm2415-204ENSMUST00000190235 2004 ntBASIC25.24■■□□□ 1.63
Nckap1lQ8K1X4 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC25.23■■□□□ 1.63
Nckap1lQ8K1X4 Gm17082-201ENSMUST00000166043 1091 ntBASIC25.23■■□□□ 1.63
Nckap1lQ8K1X4 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Nckap1lQ8K1X4 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC25.21■■□□□ 1.63
Nckap1lQ8K1X4 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
Nckap1lQ8K1X4 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Nckap1lQ8K1X4 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC25.17■■□□□ 1.62
Nckap1lQ8K1X4 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC25.16■■□□□ 1.62
Nckap1lQ8K1X4 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC25.16■■□□□ 1.62
Nckap1lQ8K1X4 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC25.15■■□□□ 1.62
Retrieved 100 of 76,532 protein–RNA pairs in 8.8 ms