Protein–RNA interactions for Protein: Q8CC12

Cdan1, Codanin-1, mousemouse

Predictions only

Length 1,239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdan1Q8CC12 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
Cdan1Q8CC12 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC31.99■■■□□ 2.71
Cdan1Q8CC12 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC31.99■■■□□ 2.71
Cdan1Q8CC12 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC31.97■■■□□ 2.71
Cdan1Q8CC12 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
Cdan1Q8CC12 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC31.93■■■□□ 2.7
Cdan1Q8CC12 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC31.93■■■□□ 2.7
Cdan1Q8CC12 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC31.89■■■□□ 2.7
Cdan1Q8CC12 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC31.88■■■□□ 2.69
Cdan1Q8CC12 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC31.83■■■□□ 2.69
Cdan1Q8CC12 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC31.78■■■□□ 2.68
Cdan1Q8CC12 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC31.75■■■□□ 2.67
Cdan1Q8CC12 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC31.75■■■□□ 2.67
Cdan1Q8CC12 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC31.75■■■□□ 2.67
Cdan1Q8CC12 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC31.75■■■□□ 2.67
Cdan1Q8CC12 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
Cdan1Q8CC12 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC31.66■■■□□ 2.66
Cdan1Q8CC12 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
Cdan1Q8CC12 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
Cdan1Q8CC12 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
Cdan1Q8CC12 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
Cdan1Q8CC12 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
Cdan1Q8CC12 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC31.53■■■□□ 2.64
Cdan1Q8CC12 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
Cdan1Q8CC12 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
Cdan1Q8CC12 Gm26115-201ENSMUST00000175605 87 ntBASIC31.49■■■□□ 2.63
Cdan1Q8CC12 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
Cdan1Q8CC12 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
Cdan1Q8CC12 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC31.45■■■□□ 2.63
Cdan1Q8CC12 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC31.4■■■□□ 2.62
Cdan1Q8CC12 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
Cdan1Q8CC12 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC31.4■■■□□ 2.62
Cdan1Q8CC12 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
Cdan1Q8CC12 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
Cdan1Q8CC12 Gm8109-201ENSMUST00000194076 746 ntBASIC31.35■■■□□ 2.61
Cdan1Q8CC12 Gm17082-201ENSMUST00000166043 1091 ntBASIC31.34■■■□□ 2.61
Cdan1Q8CC12 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
Cdan1Q8CC12 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
Cdan1Q8CC12 Zfp131-207ENSMUST00000224946 1783 ntBASIC31.25■■■□□ 2.59
Cdan1Q8CC12 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
Cdan1Q8CC12 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC31.22■■■□□ 2.59
Cdan1Q8CC12 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC31.22■■■□□ 2.59
Cdan1Q8CC12 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC31.21■■■□□ 2.59
Cdan1Q8CC12 Gm27322-201ENSMUST00000184007 104 ntBASIC31.2■■■□□ 2.59
Cdan1Q8CC12 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC31.19■■■□□ 2.58
Cdan1Q8CC12 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC31.11■■■□□ 2.57
Cdan1Q8CC12 AL845457.1-201ENSMUST00000197244 68 ntBASIC31.09■■■□□ 2.57
Cdan1Q8CC12 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
Cdan1Q8CC12 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC31.07■■■□□ 2.56
Cdan1Q8CC12 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
Cdan1Q8CC12 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
Cdan1Q8CC12 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
Cdan1Q8CC12 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
Cdan1Q8CC12 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
Cdan1Q8CC12 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC30.96■■■□□ 2.55
Cdan1Q8CC12 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC30.96■■■□□ 2.55
Cdan1Q8CC12 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC30.93■■■□□ 2.54
Cdan1Q8CC12 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
Cdan1Q8CC12 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC30.89■■■□□ 2.54
Cdan1Q8CC12 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC30.83■■■□□ 2.53
Cdan1Q8CC12 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
Cdan1Q8CC12 AC166822.3-201ENSMUST00000227394 661 ntBASIC30.82■■■□□ 2.52
Cdan1Q8CC12 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
Cdan1Q8CC12 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC30.81■■■□□ 2.52
Cdan1Q8CC12 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC30.77■■■□□ 2.52
Cdan1Q8CC12 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
Cdan1Q8CC12 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC30.76■■■□□ 2.51
Cdan1Q8CC12 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
Cdan1Q8CC12 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
Cdan1Q8CC12 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
Cdan1Q8CC12 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC30.67■■■□□ 2.5
Cdan1Q8CC12 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC30.62■■■□□ 2.49
Cdan1Q8CC12 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
Cdan1Q8CC12 Mipep-204ENSMUST00000225043 1548 ntBASIC30.61■■■□□ 2.49
Cdan1Q8CC12 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC30.6■■■□□ 2.49
Cdan1Q8CC12 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
Cdan1Q8CC12 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
Cdan1Q8CC12 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC30.59■■■□□ 2.49
Cdan1Q8CC12 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
Cdan1Q8CC12 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
Cdan1Q8CC12 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
Cdan1Q8CC12 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC30.54■■■□□ 2.48
Cdan1Q8CC12 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
Cdan1Q8CC12 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC30.52■■■□□ 2.48
Cdan1Q8CC12 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
Cdan1Q8CC12 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC30.48■■■□□ 2.47
Cdan1Q8CC12 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.47
Cdan1Q8CC12 Gm24804-201ENSMUST00000174982 85 ntBASIC30.43■■■□□ 2.46
Cdan1Q8CC12 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
Cdan1Q8CC12 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC30.39■■■□□ 2.45
Cdan1Q8CC12 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
Cdan1Q8CC12 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC30.32■■■□□ 2.44
Cdan1Q8CC12 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC30.32■■■□□ 2.44
Cdan1Q8CC12 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC30.3■■■□□ 2.44
Cdan1Q8CC12 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
Cdan1Q8CC12 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC30.27■■■□□ 2.44
Cdan1Q8CC12 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
Cdan1Q8CC12 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
Cdan1Q8CC12 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
Cdan1Q8CC12 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms