Protein–RNA interactions for Protein: Q8CC12

Cdan1, Codanin-1, mousemouse

Predictions only

Length 1,239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdan1Q8CC12 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2,71
Cdan1Q8CC12 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC31,99■■■□□ 2,71
Cdan1Q8CC12 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC31,99■■■□□ 2,71
Cdan1Q8CC12 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC31,97■■■□□ 2,71
Cdan1Q8CC12 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC31,96■■■□□ 2,71
Cdan1Q8CC12 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC31,93■■■□□ 2,7
Cdan1Q8CC12 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC31,93■■■□□ 2,7
Cdan1Q8CC12 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC31,89■■■□□ 2,7
Cdan1Q8CC12 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC31,88■■■□□ 2,69
Cdan1Q8CC12 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC31,83■■■□□ 2,69
Cdan1Q8CC12 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC31,78■■■□□ 2,68
Cdan1Q8CC12 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC31,75■■■□□ 2,67
Cdan1Q8CC12 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC31,75■■■□□ 2,67
Cdan1Q8CC12 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC31,75■■■□□ 2,67
Cdan1Q8CC12 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC31,75■■■□□ 2,67
Cdan1Q8CC12 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC31,67■■■□□ 2,66
Cdan1Q8CC12 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC31,66■■■□□ 2,66
Cdan1Q8CC12 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC31,65■■■□□ 2,66
Cdan1Q8CC12 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC31,61■■■□□ 2,65
Cdan1Q8CC12 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC31,6■■■□□ 2,65
Cdan1Q8CC12 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC31,58■■■□□ 2,65
Cdan1Q8CC12 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC31,58■■■□□ 2,65
Cdan1Q8CC12 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC31,53■■■□□ 2,64
Cdan1Q8CC12 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC31,52■■■□□ 2,64
Cdan1Q8CC12 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC31,5■■■□□ 2,63
Cdan1Q8CC12 Gm26115-201ENSMUST00000175605 87 ntBASIC31,49■■■□□ 2,63
Cdan1Q8CC12 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC31,47■■■□□ 2,63
Cdan1Q8CC12 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC31,46■■■□□ 2,63
Cdan1Q8CC12 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC31,45■■■□□ 2,63
Cdan1Q8CC12 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC31,4■■■□□ 2,62
Cdan1Q8CC12 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC31,4■■■□□ 2,62
Cdan1Q8CC12 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC31,4■■■□□ 2,62
Cdan1Q8CC12 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC31,38■■■□□ 2,61
Cdan1Q8CC12 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC31,38■■■□□ 2,61
Cdan1Q8CC12 Gm8109-201ENSMUST00000194076 746 ntBASIC31,35■■■□□ 2,61
Cdan1Q8CC12 Gm17082-201ENSMUST00000166043 1091 ntBASIC31,34■■■□□ 2,61
Cdan1Q8CC12 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC31,34■■■□□ 2,61
Cdan1Q8CC12 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC31,28■■■□□ 2,6
Cdan1Q8CC12 Zfp131-207ENSMUST00000224946 1783 ntBASIC31,25■■■□□ 2,59
Cdan1Q8CC12 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC31,24■■■□□ 2,59
Cdan1Q8CC12 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC31,22■■■□□ 2,59
Cdan1Q8CC12 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC31,22■■■□□ 2,59
Cdan1Q8CC12 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC31,21■■■□□ 2,59
Cdan1Q8CC12 Gm27322-201ENSMUST00000184007 104 ntBASIC31,2■■■□□ 2,59
Cdan1Q8CC12 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC31,19■■■□□ 2,58
Cdan1Q8CC12 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC31,11■■■□□ 2,57
Cdan1Q8CC12 AL845457.1-201ENSMUST00000197244 68 ntBASIC31,09■■■□□ 2,57
Cdan1Q8CC12 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC31,08■■■□□ 2,57
Cdan1Q8CC12 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC31,07■■■□□ 2,56
Cdan1Q8CC12 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC31,06■■■□□ 2,56
Cdan1Q8CC12 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC31,04■■■□□ 2,56
Cdan1Q8CC12 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC31,02■■■□□ 2,56
Cdan1Q8CC12 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC30,98■■■□□ 2,55
Cdan1Q8CC12 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC30,96■■■□□ 2,55
Cdan1Q8CC12 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC30,96■■■□□ 2,55
Cdan1Q8CC12 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC30,96■■■□□ 2,55
Cdan1Q8CC12 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC30,93■■■□□ 2,54
Cdan1Q8CC12 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC30,92■■■□□ 2,54
Cdan1Q8CC12 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC30,89■■■□□ 2,54
Cdan1Q8CC12 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC30,83■■■□□ 2,53
Cdan1Q8CC12 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC30,82■■■□□ 2,52
Cdan1Q8CC12 AC166822.3-201ENSMUST00000227394 661 ntBASIC30,82■■■□□ 2,52
Cdan1Q8CC12 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC30,82■■■□□ 2,52
Cdan1Q8CC12 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC30,81■■■□□ 2,52
Cdan1Q8CC12 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC30,77■■■□□ 2,52
Cdan1Q8CC12 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC30,77■■■□□ 2,52
Cdan1Q8CC12 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC30,76■■■□□ 2,51
Cdan1Q8CC12 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC30,73■■■□□ 2,51
Cdan1Q8CC12 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC30,71■■■□□ 2,51
Cdan1Q8CC12 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC30,69■■■□□ 2,5
Cdan1Q8CC12 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC30,67■■■□□ 2,5
Cdan1Q8CC12 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC30,62■■■□□ 2,49
Cdan1Q8CC12 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC30,61■■■□□ 2,49
Cdan1Q8CC12 Mipep-204ENSMUST00000225043 1548 ntBASIC30,61■■■□□ 2,49
Cdan1Q8CC12 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC30,6■■■□□ 2,49
Cdan1Q8CC12 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC30,6■■■□□ 2,49
Cdan1Q8CC12 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC30,59■■■□□ 2,49
Cdan1Q8CC12 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC30,59■■■□□ 2,49
Cdan1Q8CC12 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC30,58■■■□□ 2,49
Cdan1Q8CC12 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC30,58■■■□□ 2,49
Cdan1Q8CC12 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC30,55■■■□□ 2,48
Cdan1Q8CC12 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC30,54■■■□□ 2,48
Cdan1Q8CC12 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC30,53■■■□□ 2,48
Cdan1Q8CC12 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC30,52■■■□□ 2,48
Cdan1Q8CC12 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC30,49■■■□□ 2,47
Cdan1Q8CC12 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC30,48■■■□□ 2,47
Cdan1Q8CC12 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC30,45■■■□□ 2,47
Cdan1Q8CC12 Gm24804-201ENSMUST00000174982 85 ntBASIC30,43■■■□□ 2,46
Cdan1Q8CC12 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC30,4■■■□□ 2,46
Cdan1Q8CC12 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC30,39■■■□□ 2,45
Cdan1Q8CC12 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC30,38■■■□□ 2,45
Cdan1Q8CC12 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC30,32■■■□□ 2,44
Cdan1Q8CC12 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC30,32■■■□□ 2,44
Cdan1Q8CC12 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC30,3■■■□□ 2,44
Cdan1Q8CC12 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC30,29■■■□□ 2,44
Cdan1Q8CC12 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC30,27■■■□□ 2,44
Cdan1Q8CC12 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC30,24■■■□□ 2,43
Cdan1Q8CC12 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC30,24■■■□□ 2,43
Cdan1Q8CC12 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC30,23■■■□□ 2,43
Cdan1Q8CC12 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC30,23■■■□□ 2,43
Retrieved 100 of 76,532 protein–RNA pairs in 11,5 ms