Protein–RNA interactions for Protein: Q8CA71

Shisa4, Protein shisa-4, mousemouse

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa4Q8CA71 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC33,03■■■□□ 2,88
Shisa4Q8CA71 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC32,98■■■□□ 2,87
Shisa4Q8CA71 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC32,97■■■□□ 2,87
Shisa4Q8CA71 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC32,94■■■□□ 2,86
Shisa4Q8CA71 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC32,93■■■□□ 2,86
Shisa4Q8CA71 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC32,91■■■□□ 2,86
Shisa4Q8CA71 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC32,89■■■□□ 2,86
Shisa4Q8CA71 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC32,87■■■□□ 2,85
Shisa4Q8CA71 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC32,84■■■□□ 2,85
Shisa4Q8CA71 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC32,84■■■□□ 2,85
Shisa4Q8CA71 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC32,8■■■□□ 2,84
Shisa4Q8CA71 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC32,78■■■□□ 2,84
Shisa4Q8CA71 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC32,75■■■□□ 2,83
Shisa4Q8CA71 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC32,74■■■□□ 2,83
Shisa4Q8CA71 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC32,72■■■□□ 2,83
Shisa4Q8CA71 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC32,71■■■□□ 2,83
Shisa4Q8CA71 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC32,71■■■□□ 2,83
Shisa4Q8CA71 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC32,71■■■□□ 2,83
Shisa4Q8CA71 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC32,7■■■□□ 2,83
Shisa4Q8CA71 Gm26115-201ENSMUST00000175605 87 ntBASIC32,7■■■□□ 2,83
Shisa4Q8CA71 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC32,67■■■□□ 2,82
Shisa4Q8CA71 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC32,64■■■□□ 2,82
Shisa4Q8CA71 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC32,62■■■□□ 2,81
Shisa4Q8CA71 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC32,58■■■□□ 2,81
Shisa4Q8CA71 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC32,52■■■□□ 2,8
Shisa4Q8CA71 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC32,49■■■□□ 2,79
Shisa4Q8CA71 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC32,47■■■□□ 2,79
Shisa4Q8CA71 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC32,47■■■□□ 2,79
Shisa4Q8CA71 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC32,47■■■□□ 2,79
Shisa4Q8CA71 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC32,46■■■□□ 2,79
Shisa4Q8CA71 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC32,43■■■□□ 2,78
Shisa4Q8CA71 Gm8109-201ENSMUST00000194076 746 ntBASIC32,41■■■□□ 2,78
Shisa4Q8CA71 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC32,38■■■□□ 2,77
Shisa4Q8CA71 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC32,33■■■□□ 2,77
Shisa4Q8CA71 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC32,32■■■□□ 2,76
Shisa4Q8CA71 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC32,29■■■□□ 2,76
Shisa4Q8CA71 Zfp131-207ENSMUST00000224946 1783 ntBASIC32,28■■■□□ 2,76
Shisa4Q8CA71 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC32,27■■■□□ 2,76
Shisa4Q8CA71 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC32,26■■■□□ 2,75
Shisa4Q8CA71 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC32,26■■■□□ 2,75
Shisa4Q8CA71 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC32,24■■■□□ 2,75
Shisa4Q8CA71 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC32,19■■■□□ 2,74
Shisa4Q8CA71 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC32,17■■■□□ 2,74
Shisa4Q8CA71 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC32,16■■■□□ 2,74
Shisa4Q8CA71 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC32,16■■■□□ 2,74
Shisa4Q8CA71 Gm17082-201ENSMUST00000166043 1091 ntBASIC32,14■■■□□ 2,74
Shisa4Q8CA71 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC32,1■■■□□ 2,73
Shisa4Q8CA71 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC32,09■■■□□ 2,73
Shisa4Q8CA71 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC32,05■■■□□ 2,72
Shisa4Q8CA71 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC32,02■■■□□ 2,72
Shisa4Q8CA71 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC32,02■■■□□ 2,72
Shisa4Q8CA71 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC32,01■■■□□ 2,71
Shisa4Q8CA71 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC31,98■■■□□ 2,71
Shisa4Q8CA71 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC31,98■■■□□ 2,71
Shisa4Q8CA71 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC31,95■■■□□ 2,71
Shisa4Q8CA71 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC31,94■■■□□ 2,7
Shisa4Q8CA71 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC31,92■■■□□ 2,7
Shisa4Q8CA71 AL845457.1-201ENSMUST00000197244 68 ntBASIC31,9■■■□□ 2,7
Shisa4Q8CA71 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC31,9■■■□□ 2,7
Shisa4Q8CA71 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC31,86■■■□□ 2,69
Shisa4Q8CA71 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC31,85■■■□□ 2,69
Shisa4Q8CA71 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC31,84■■■□□ 2,69
Shisa4Q8CA71 Gm27322-201ENSMUST00000184007 104 ntBASIC31,81■■■□□ 2,68
Shisa4Q8CA71 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC31,78■■■□□ 2,68
Shisa4Q8CA71 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC31,76■■■□□ 2,67
Shisa4Q8CA71 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC31,74■■■□□ 2,67
Shisa4Q8CA71 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC31,73■■■□□ 2,67
Shisa4Q8CA71 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC31,72■■■□□ 2,67
Shisa4Q8CA71 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC31,71■■■□□ 2,67
Shisa4Q8CA71 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC31,7■■■□□ 2,67
Shisa4Q8CA71 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC31,69■■■□□ 2,66
Shisa4Q8CA71 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC31,66■■■□□ 2,66
Shisa4Q8CA71 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC31,66■■■□□ 2,66
Shisa4Q8CA71 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC31,58■■■□□ 2,65
Shisa4Q8CA71 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC31,57■■■□□ 2,64
Shisa4Q8CA71 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC31,55■■■□□ 2,64
Shisa4Q8CA71 AC166822.3-201ENSMUST00000227394 661 ntBASIC31,52■■■□□ 2,64
Shisa4Q8CA71 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC31,49■■■□□ 2,63
Shisa4Q8CA71 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC31,48■■■□□ 2,63
Shisa4Q8CA71 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC31,48■■■□□ 2,63
Shisa4Q8CA71 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC31,46■■■□□ 2,63
Shisa4Q8CA71 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC31,45■■■□□ 2,62
Shisa4Q8CA71 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC31,45■■■□□ 2,62
Shisa4Q8CA71 Mipep-204ENSMUST00000225043 1548 ntBASIC31,44■■■□□ 2,62
Shisa4Q8CA71 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC31,43■■■□□ 2,62
Shisa4Q8CA71 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC31,41■■■□□ 2,62
Shisa4Q8CA71 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC31,41■■■□□ 2,62
Shisa4Q8CA71 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC31,39■■■□□ 2,61
Shisa4Q8CA71 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC31,37■■■□□ 2,61
Shisa4Q8CA71 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC31,35■■■□□ 2,61
Shisa4Q8CA71 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC31,33■■■□□ 2,61
Shisa4Q8CA71 Gm24804-201ENSMUST00000174982 85 ntBASIC31,32■■■□□ 2,6
Shisa4Q8CA71 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC31,32■■■□□ 2,6
Shisa4Q8CA71 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC31,29■■■□□ 2,6
Shisa4Q8CA71 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC31,29■■■□□ 2,6
Shisa4Q8CA71 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC31,29■■■□□ 2,6
Shisa4Q8CA71 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC31,28■■■□□ 2,6
Shisa4Q8CA71 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC31,27■■■□□ 2,6
Shisa4Q8CA71 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC31,26■■■□□ 2,6
Shisa4Q8CA71 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC31,2■■■□□ 2,58
Retrieved 100 of 76,532 protein–RNA pairs in 29,2 ms