Protein–RNA interactions for Protein: Q8CA71

Shisa4, Protein shisa-4, mousemouse

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa4Q8CA71 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC33.03■■■□□ 2.88
Shisa4Q8CA71 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC32.98■■■□□ 2.87
Shisa4Q8CA71 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC32.97■■■□□ 2.87
Shisa4Q8CA71 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC32.94■■■□□ 2.86
Shisa4Q8CA71 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC32.93■■■□□ 2.86
Shisa4Q8CA71 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC32.91■■■□□ 2.86
Shisa4Q8CA71 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC32.89■■■□□ 2.86
Shisa4Q8CA71 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC32.87■■■□□ 2.85
Shisa4Q8CA71 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC32.84■■■□□ 2.85
Shisa4Q8CA71 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC32.84■■■□□ 2.85
Shisa4Q8CA71 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC32.8■■■□□ 2.84
Shisa4Q8CA71 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC32.78■■■□□ 2.84
Shisa4Q8CA71 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC32.75■■■□□ 2.83
Shisa4Q8CA71 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC32.74■■■□□ 2.83
Shisa4Q8CA71 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC32.72■■■□□ 2.83
Shisa4Q8CA71 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC32.71■■■□□ 2.83
Shisa4Q8CA71 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC32.71■■■□□ 2.83
Shisa4Q8CA71 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC32.71■■■□□ 2.83
Shisa4Q8CA71 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC32.7■■■□□ 2.83
Shisa4Q8CA71 Gm26115-201ENSMUST00000175605 87 ntBASIC32.7■■■□□ 2.83
Shisa4Q8CA71 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC32.67■■■□□ 2.82
Shisa4Q8CA71 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC32.64■■■□□ 2.82
Shisa4Q8CA71 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC32.62■■■□□ 2.81
Shisa4Q8CA71 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC32.58■■■□□ 2.81
Shisa4Q8CA71 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC32.52■■■□□ 2.8
Shisa4Q8CA71 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC32.49■■■□□ 2.79
Shisa4Q8CA71 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC32.47■■■□□ 2.79
Shisa4Q8CA71 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC32.47■■■□□ 2.79
Shisa4Q8CA71 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC32.47■■■□□ 2.79
Shisa4Q8CA71 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC32.46■■■□□ 2.79
Shisa4Q8CA71 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC32.43■■■□□ 2.78
Shisa4Q8CA71 Gm8109-201ENSMUST00000194076 746 ntBASIC32.41■■■□□ 2.78
Shisa4Q8CA71 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC32.38■■■□□ 2.77
Shisa4Q8CA71 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC32.33■■■□□ 2.77
Shisa4Q8CA71 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC32.32■■■□□ 2.76
Shisa4Q8CA71 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC32.29■■■□□ 2.76
Shisa4Q8CA71 Zfp131-207ENSMUST00000224946 1783 ntBASIC32.28■■■□□ 2.76
Shisa4Q8CA71 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC32.27■■■□□ 2.76
Shisa4Q8CA71 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC32.26■■■□□ 2.75
Shisa4Q8CA71 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC32.26■■■□□ 2.75
Shisa4Q8CA71 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC32.24■■■□□ 2.75
Shisa4Q8CA71 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC32.19■■■□□ 2.74
Shisa4Q8CA71 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC32.17■■■□□ 2.74
Shisa4Q8CA71 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC32.16■■■□□ 2.74
Shisa4Q8CA71 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC32.16■■■□□ 2.74
Shisa4Q8CA71 Gm17082-201ENSMUST00000166043 1091 ntBASIC32.14■■■□□ 2.74
Shisa4Q8CA71 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC32.1■■■□□ 2.73
Shisa4Q8CA71 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC32.09■■■□□ 2.73
Shisa4Q8CA71 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC32.05■■■□□ 2.72
Shisa4Q8CA71 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
Shisa4Q8CA71 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC32.02■■■□□ 2.72
Shisa4Q8CA71 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC32.01■■■□□ 2.71
Shisa4Q8CA71 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
Shisa4Q8CA71 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
Shisa4Q8CA71 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.71
Shisa4Q8CA71 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
Shisa4Q8CA71 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
Shisa4Q8CA71 AL845457.1-201ENSMUST00000197244 68 ntBASIC31.9■■■□□ 2.7
Shisa4Q8CA71 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
Shisa4Q8CA71 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC31.86■■■□□ 2.69
Shisa4Q8CA71 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC31.85■■■□□ 2.69
Shisa4Q8CA71 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
Shisa4Q8CA71 Gm27322-201ENSMUST00000184007 104 ntBASIC31.81■■■□□ 2.68
Shisa4Q8CA71 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC31.78■■■□□ 2.68
Shisa4Q8CA71 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC31.76■■■□□ 2.67
Shisa4Q8CA71 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
Shisa4Q8CA71 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC31.73■■■□□ 2.67
Shisa4Q8CA71 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC31.72■■■□□ 2.67
Shisa4Q8CA71 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC31.71■■■□□ 2.67
Shisa4Q8CA71 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC31.7■■■□□ 2.67
Shisa4Q8CA71 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC31.69■■■□□ 2.66
Shisa4Q8CA71 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
Shisa4Q8CA71 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
Shisa4Q8CA71 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC31.58■■■□□ 2.65
Shisa4Q8CA71 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC31.57■■■□□ 2.64
Shisa4Q8CA71 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
Shisa4Q8CA71 AC166822.3-201ENSMUST00000227394 661 ntBASIC31.52■■■□□ 2.64
Shisa4Q8CA71 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC31.49■■■□□ 2.63
Shisa4Q8CA71 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC31.48■■■□□ 2.63
Shisa4Q8CA71 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
Shisa4Q8CA71 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC31.46■■■□□ 2.63
Shisa4Q8CA71 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC31.45■■■□□ 2.62
Shisa4Q8CA71 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.62
Shisa4Q8CA71 Mipep-204ENSMUST00000225043 1548 ntBASIC31.44■■■□□ 2.62
Shisa4Q8CA71 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
Shisa4Q8CA71 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
Shisa4Q8CA71 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
Shisa4Q8CA71 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.61
Shisa4Q8CA71 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
Shisa4Q8CA71 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC31.35■■■□□ 2.61
Shisa4Q8CA71 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
Shisa4Q8CA71 Gm24804-201ENSMUST00000174982 85 ntBASIC31.32■■■□□ 2.6
Shisa4Q8CA71 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
Shisa4Q8CA71 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC31.29■■■□□ 2.6
Shisa4Q8CA71 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC31.29■■■□□ 2.6
Shisa4Q8CA71 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
Shisa4Q8CA71 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC31.28■■■□□ 2.6
Shisa4Q8CA71 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
Shisa4Q8CA71 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC31.26■■■□□ 2.6
Shisa4Q8CA71 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.58
Retrieved 100 of 76,532 protein–RNA pairs in 8.3 ms