Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC33.1■■■□□ 2.89
Alx1Q8C8B0 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC33.1■■■□□ 2.89
Alx1Q8C8B0 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC33.07■■■□□ 2.89
Alx1Q8C8B0 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC33.05■■■□□ 2.88
Alx1Q8C8B0 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC33.03■■■□□ 2.88
Alx1Q8C8B0 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC33.01■■■□□ 2.87
Alx1Q8C8B0 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC32.99■■■□□ 2.87
Alx1Q8C8B0 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC32.97■■■□□ 2.87
Alx1Q8C8B0 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC32.97■■■□□ 2.87
Alx1Q8C8B0 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC32.96■■■□□ 2.87
Alx1Q8C8B0 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC32.92■■■□□ 2.86
Alx1Q8C8B0 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC32.88■■■□□ 2.85
Alx1Q8C8B0 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC32.88■■■□□ 2.85
Alx1Q8C8B0 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC32.85■■■□□ 2.85
Alx1Q8C8B0 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC32.82■■■□□ 2.84
Alx1Q8C8B0 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC32.8■■■□□ 2.84
Alx1Q8C8B0 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC32.78■■■□□ 2.84
Alx1Q8C8B0 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC32.77■■■□□ 2.84
Alx1Q8C8B0 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC32.76■■■□□ 2.83
Alx1Q8C8B0 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC32.74■■■□□ 2.83
Alx1Q8C8B0 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC32.68■■■□□ 2.82
Alx1Q8C8B0 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC32.67■■■□□ 2.82
Alx1Q8C8B0 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC32.64■■■□□ 2.82
Alx1Q8C8B0 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC32.61■■■□□ 2.81
Alx1Q8C8B0 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC32.61■■■□□ 2.81
Alx1Q8C8B0 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC32.6■■■□□ 2.81
Alx1Q8C8B0 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC32.58■■■□□ 2.81
Alx1Q8C8B0 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC32.55■■■□□ 2.8
Alx1Q8C8B0 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC32.52■■■□□ 2.8
Alx1Q8C8B0 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.8
Alx1Q8C8B0 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC32.49■■■□□ 2.79
Alx1Q8C8B0 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC32.46■■■□□ 2.79
Alx1Q8C8B0 Zfp131-207ENSMUST00000224946 1783 ntBASIC32.4■■■□□ 2.78
Alx1Q8C8B0 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC32.4■■■□□ 2.78
Alx1Q8C8B0 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC32.39■■■□□ 2.78
Alx1Q8C8B0 Gm26115-201ENSMUST00000175605 87 ntBASIC32.37■■■□□ 2.77
Alx1Q8C8B0 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC32.35■■■□□ 2.77
Alx1Q8C8B0 Gm17082-201ENSMUST00000166043 1091 ntBASIC32.33■■■□□ 2.77
Alx1Q8C8B0 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC32.31■■■□□ 2.76
Alx1Q8C8B0 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC32.3■■■□□ 2.76
Alx1Q8C8B0 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC32.29■■■□□ 2.76
Alx1Q8C8B0 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC32.25■■■□□ 2.75
Alx1Q8C8B0 Gm8109-201ENSMUST00000194076 746 ntBASIC32.24■■■□□ 2.75
Alx1Q8C8B0 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC32.19■■■□□ 2.74
Alx1Q8C8B0 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC32.17■■■□□ 2.74
Alx1Q8C8B0 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC32.16■■■□□ 2.74
Alx1Q8C8B0 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC32.15■■■□□ 2.74
Alx1Q8C8B0 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC32.15■■■□□ 2.74
Alx1Q8C8B0 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC32.13■■■□□ 2.73
Alx1Q8C8B0 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC32.12■■■□□ 2.73
Alx1Q8C8B0 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC32.12■■■□□ 2.73
Alx1Q8C8B0 Gm27322-201ENSMUST00000184007 104 ntBASIC32.11■■■□□ 2.73
Alx1Q8C8B0 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC32.11■■■□□ 2.73
Alx1Q8C8B0 AL845457.1-201ENSMUST00000197244 68 ntBASIC32.08■■■□□ 2.73
Alx1Q8C8B0 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC32.08■■■□□ 2.73
Alx1Q8C8B0 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC32.06■■■□□ 2.72
Alx1Q8C8B0 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC32.03■■■□□ 2.72
Alx1Q8C8B0 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC32.02■■■□□ 2.72
Alx1Q8C8B0 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC32.01■■■□□ 2.72
Alx1Q8C8B0 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC32■■■□□ 2.71
Alx1Q8C8B0 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC31.99■■■□□ 2.71
Alx1Q8C8B0 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC31.99■■■□□ 2.71
Alx1Q8C8B0 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC31.99■■■□□ 2.71
Alx1Q8C8B0 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC31.98■■■□□ 2.71
Alx1Q8C8B0 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC31.93■■■□□ 2.7
Alx1Q8C8B0 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC31.87■■■□□ 2.69
Alx1Q8C8B0 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC31.87■■■□□ 2.69
Alx1Q8C8B0 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
Alx1Q8C8B0 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC31.86■■■□□ 2.69
Alx1Q8C8B0 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC31.79■■■□□ 2.68
Alx1Q8C8B0 AC166822.3-201ENSMUST00000227394 661 ntBASIC31.77■■■□□ 2.68
Alx1Q8C8B0 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
Alx1Q8C8B0 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC31.77■■■□□ 2.68
Alx1Q8C8B0 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.68
Alx1Q8C8B0 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
Alx1Q8C8B0 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC31.73■■■□□ 2.67
Alx1Q8C8B0 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.67
Alx1Q8C8B0 Mipep-204ENSMUST00000225043 1548 ntBASIC31.63■■■□□ 2.65
Alx1Q8C8B0 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC31.63■■■□□ 2.65
Alx1Q8C8B0 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
Alx1Q8C8B0 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC31.62■■■□□ 2.65
Alx1Q8C8B0 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC31.57■■■□□ 2.64
Alx1Q8C8B0 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
Alx1Q8C8B0 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
Alx1Q8C8B0 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC31.55■■■□□ 2.64
Alx1Q8C8B0 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
Alx1Q8C8B0 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
Alx1Q8C8B0 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
Alx1Q8C8B0 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
Alx1Q8C8B0 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC31.47■■■□□ 2.63
Alx1Q8C8B0 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.62
Alx1Q8C8B0 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC31.44■■■□□ 2.62
Alx1Q8C8B0 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC31.44■■■□□ 2.62
Alx1Q8C8B0 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
Alx1Q8C8B0 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC31.39■■■□□ 2.62
Alx1Q8C8B0 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
Alx1Q8C8B0 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
Alx1Q8C8B0 Gm24804-201ENSMUST00000174982 85 ntBASIC31.35■■■□□ 2.61
Alx1Q8C8B0 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
Alx1Q8C8B0 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
Retrieved 100 of 76,532 protein–RNA pairs in 7.6 ms