Protein–RNA interactions for Protein: Q8BYR1

Lcmt2, tRNA wybutosine-synthesizing protein 4, mousemouse

Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lcmt2Q8BYR1 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
Lcmt2Q8BYR1 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
Lcmt2Q8BYR1 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
Lcmt2Q8BYR1 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
Lcmt2Q8BYR1 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC25.58■■□□□ 1.69
Lcmt2Q8BYR1 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC25.55■■□□□ 1.68
Lcmt2Q8BYR1 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC25.53■■□□□ 1.68
Lcmt2Q8BYR1 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC25.52■■□□□ 1.68
Lcmt2Q8BYR1 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
Lcmt2Q8BYR1 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Lcmt2Q8BYR1 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Lcmt2Q8BYR1 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC25.41■■□□□ 1.66
Lcmt2Q8BYR1 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC25.36■■□□□ 1.65
Lcmt2Q8BYR1 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
Lcmt2Q8BYR1 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC25.35■■□□□ 1.65
Lcmt2Q8BYR1 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC25.32■■□□□ 1.64
Lcmt2Q8BYR1 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Lcmt2Q8BYR1 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
Lcmt2Q8BYR1 Rab21-202ENSMUST00000218831 843 ntBASIC25.25■■□□□ 1.63
Lcmt2Q8BYR1 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Lcmt2Q8BYR1 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Lcmt2Q8BYR1 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.63
Lcmt2Q8BYR1 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC25.2■■□□□ 1.62
Lcmt2Q8BYR1 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
Lcmt2Q8BYR1 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC25.15■■□□□ 1.62
Lcmt2Q8BYR1 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC25.14■■□□□ 1.62
Lcmt2Q8BYR1 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
Lcmt2Q8BYR1 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC25.13■■□□□ 1.61
Lcmt2Q8BYR1 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Lcmt2Q8BYR1 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Lcmt2Q8BYR1 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
Lcmt2Q8BYR1 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Lcmt2Q8BYR1 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC25.05■■□□□ 1.6
Lcmt2Q8BYR1 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC25.02■■□□□ 1.6
Lcmt2Q8BYR1 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC25■■□□□ 1.59
Lcmt2Q8BYR1 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC25■■□□□ 1.59
Lcmt2Q8BYR1 Gm25262-201ENSMUST00000174934 133 ntBASIC24.99■■□□□ 1.59
Lcmt2Q8BYR1 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
Lcmt2Q8BYR1 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC24.98■■□□□ 1.59
Lcmt2Q8BYR1 Zfp131-207ENSMUST00000224946 1783 ntBASIC24.97■■□□□ 1.59
Lcmt2Q8BYR1 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC24.97■■□□□ 1.59
Lcmt2Q8BYR1 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC24.96■■□□□ 1.59
Lcmt2Q8BYR1 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC24.95■■□□□ 1.58
Lcmt2Q8BYR1 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC24.94■■□□□ 1.58
Lcmt2Q8BYR1 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC24.94■■□□□ 1.58
Lcmt2Q8BYR1 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC24.92■■□□□ 1.58
Lcmt2Q8BYR1 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC24.89■■□□□ 1.57
Lcmt2Q8BYR1 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC24.88■■□□□ 1.57
Lcmt2Q8BYR1 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC24.85■■□□□ 1.57
Lcmt2Q8BYR1 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
Lcmt2Q8BYR1 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.56
Lcmt2Q8BYR1 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
Lcmt2Q8BYR1 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
Lcmt2Q8BYR1 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC24.79■■□□□ 1.56
Lcmt2Q8BYR1 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Lcmt2Q8BYR1 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
Lcmt2Q8BYR1 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC24.77■■□□□ 1.56
Lcmt2Q8BYR1 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
Lcmt2Q8BYR1 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC24.75■■□□□ 1.55
Lcmt2Q8BYR1 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC24.75■■□□□ 1.55
Lcmt2Q8BYR1 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Lcmt2Q8BYR1 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC24.72■■□□□ 1.55
Lcmt2Q8BYR1 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC24.7■■□□□ 1.55
Lcmt2Q8BYR1 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
Lcmt2Q8BYR1 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Lcmt2Q8BYR1 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC24.66■■□□□ 1.54
Lcmt2Q8BYR1 Gm2415-204ENSMUST00000190235 2004 ntBASIC24.66■■□□□ 1.54
Lcmt2Q8BYR1 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Lcmt2Q8BYR1 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Lcmt2Q8BYR1 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
Lcmt2Q8BYR1 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC24.63■■□□□ 1.53
Lcmt2Q8BYR1 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Lcmt2Q8BYR1 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
Lcmt2Q8BYR1 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
Lcmt2Q8BYR1 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC24.58■■□□□ 1.52
Lcmt2Q8BYR1 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC24.53■■□□□ 1.52
Lcmt2Q8BYR1 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
Lcmt2Q8BYR1 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC24.52■■□□□ 1.52
Lcmt2Q8BYR1 Gm6658-202ENSMUST00000209493 1885 ntBASIC24.49■■□□□ 1.51
Lcmt2Q8BYR1 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Lcmt2Q8BYR1 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC24.44■■□□□ 1.5
Lcmt2Q8BYR1 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC24.43■■□□□ 1.5
Lcmt2Q8BYR1 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC24.43■■□□□ 1.5
Lcmt2Q8BYR1 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC24.43■■□□□ 1.5
Lcmt2Q8BYR1 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC24.42■■□□□ 1.5
Lcmt2Q8BYR1 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Lcmt2Q8BYR1 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC24.4■■□□□ 1.5
Lcmt2Q8BYR1 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
Lcmt2Q8BYR1 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Lcmt2Q8BYR1 AC153504.1-201ENSMUST00000218379 2290 ntBASIC24.37■■□□□ 1.49
Lcmt2Q8BYR1 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Lcmt2Q8BYR1 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
Lcmt2Q8BYR1 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Lcmt2Q8BYR1 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Lcmt2Q8BYR1 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
Lcmt2Q8BYR1 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
Lcmt2Q8BYR1 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC24.3■■□□□ 1.48
Lcmt2Q8BYR1 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC24.3■■□□□ 1.48
Lcmt2Q8BYR1 AL845457.1-201ENSMUST00000197244 68 ntBASIC24.29■■□□□ 1.48
Lcmt2Q8BYR1 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms