Protein–RNA interactions for Protein: Q8BKX6

Smg1, Serine/threonine-protein kinase SMG1, mousemouse

Known RBP Predictions only

Length 3,658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smg1Q8BKX6 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC24.48■■□□□ 1.51
Smg1Q8BKX6 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
Smg1Q8BKX6 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC24.45■■□□□ 1.5
Smg1Q8BKX6 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Smg1Q8BKX6 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Smg1Q8BKX6 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
Smg1Q8BKX6 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Smg1Q8BKX6 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC24.39■■□□□ 1.5
Smg1Q8BKX6 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC24.39■■□□□ 1.49
Smg1Q8BKX6 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC24.39■■□□□ 1.49
Smg1Q8BKX6 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
Smg1Q8BKX6 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC24.34■■□□□ 1.49
Smg1Q8BKX6 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC24.33■■□□□ 1.49
Smg1Q8BKX6 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Smg1Q8BKX6 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC24.24■■□□□ 1.47
Smg1Q8BKX6 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Smg1Q8BKX6 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Smg1Q8BKX6 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Smg1Q8BKX6 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Smg1Q8BKX6 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
Smg1Q8BKX6 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Smg1Q8BKX6 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
Smg1Q8BKX6 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC24.16■■□□□ 1.46
Smg1Q8BKX6 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC24.09■■□□□ 1.45
Smg1Q8BKX6 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
Smg1Q8BKX6 Gm5987-201ENSMUST00000196433 1151 ntBASIC24.06■■□□□ 1.44
Smg1Q8BKX6 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC24.05■■□□□ 1.44
Smg1Q8BKX6 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
Smg1Q8BKX6 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
Smg1Q8BKX6 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
Smg1Q8BKX6 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC24■■□□□ 1.43
Smg1Q8BKX6 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC23.99■■□□□ 1.43
Smg1Q8BKX6 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC23.98■■□□□ 1.43
Smg1Q8BKX6 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
Smg1Q8BKX6 Tdp2-203ENSMUST00000223804 1136 ntBASIC23.93■■□□□ 1.42
Smg1Q8BKX6 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC23.92■■□□□ 1.42
Smg1Q8BKX6 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Smg1Q8BKX6 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.41
Smg1Q8BKX6 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
Smg1Q8BKX6 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC23.88■■□□□ 1.41
Smg1Q8BKX6 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC23.88■■□□□ 1.41
Smg1Q8BKX6 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Smg1Q8BKX6 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Smg1Q8BKX6 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC23.79■■□□□ 1.4
Smg1Q8BKX6 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Smg1Q8BKX6 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC23.78■■□□□ 1.4
Smg1Q8BKX6 Gm10524-201ENSMUST00000181931 1893 ntBASIC23.77■■□□□ 1.4
Smg1Q8BKX6 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
Smg1Q8BKX6 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Smg1Q8BKX6 AC166822.3-201ENSMUST00000227394 661 ntBASIC23.75■■□□□ 1.39
Smg1Q8BKX6 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC23.74■■□□□ 1.39
Smg1Q8BKX6 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC23.74■■□□□ 1.39
Smg1Q8BKX6 Gm42596-201ENSMUST00000196305 1958 ntBASIC23.74■■□□□ 1.39
Smg1Q8BKX6 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
Smg1Q8BKX6 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC23.73■■□□□ 1.39
Smg1Q8BKX6 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Smg1Q8BKX6 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Smg1Q8BKX6 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Smg1Q8BKX6 Gm16148-201ENSMUST00000119653 893 ntBASIC23.7■■□□□ 1.38
Smg1Q8BKX6 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Smg1Q8BKX6 CT025624.2-201ENSMUST00000223609 1909 ntBASIC23.68■■□□□ 1.38
Smg1Q8BKX6 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Smg1Q8BKX6 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
Smg1Q8BKX6 Gm45855-201ENSMUST00000212546 880 ntBASIC23.63■■□□□ 1.37
Smg1Q8BKX6 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC23.62■■□□□ 1.37
Smg1Q8BKX6 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
Smg1Q8BKX6 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Smg1Q8BKX6 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
Smg1Q8BKX6 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Smg1Q8BKX6 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Smg1Q8BKX6 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC23.59■■□□□ 1.37
Smg1Q8BKX6 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Smg1Q8BKX6 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
Smg1Q8BKX6 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC23.56■■□□□ 1.36
Smg1Q8BKX6 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Smg1Q8BKX6 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC23.56■■□□□ 1.36
Smg1Q8BKX6 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC23.56■■□□□ 1.36
Smg1Q8BKX6 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC23.55■■□□□ 1.36
Smg1Q8BKX6 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC23.55■■□□□ 1.36
Smg1Q8BKX6 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
Smg1Q8BKX6 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC23.55■■□□□ 1.36
Smg1Q8BKX6 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC23.55■■□□□ 1.36
Smg1Q8BKX6 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
Smg1Q8BKX6 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC23.51■■□□□ 1.35
Smg1Q8BKX6 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Smg1Q8BKX6 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC23.49■■□□□ 1.35
Smg1Q8BKX6 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Smg1Q8BKX6 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC23.46■■□□□ 1.35
Smg1Q8BKX6 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC23.44■■□□□ 1.34
Smg1Q8BKX6 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC23.44■■□□□ 1.34
Smg1Q8BKX6 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC23.43■■□□□ 1.34
Smg1Q8BKX6 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Smg1Q8BKX6 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC23.41■■□□□ 1.34
Smg1Q8BKX6 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Smg1Q8BKX6 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
Smg1Q8BKX6 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Smg1Q8BKX6 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC23.38■■□□□ 1.33
Smg1Q8BKX6 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC23.38■■□□□ 1.33
Smg1Q8BKX6 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Smg1Q8BKX6 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms