Protein–RNA interactions for Protein: Q8BGE7

Trim6, Tripartite motif-containing protein 6, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim6Q8BGE7 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
Trim6Q8BGE7 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
Trim6Q8BGE7 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC28.85■■■□□ 2.21
Trim6Q8BGE7 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
Trim6Q8BGE7 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC28.84■■■□□ 2.21
Trim6Q8BGE7 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
Trim6Q8BGE7 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
Trim6Q8BGE7 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC28.8■■■□□ 2.2
Trim6Q8BGE7 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC28.78■■■□□ 2.2
Trim6Q8BGE7 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
Trim6Q8BGE7 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC28.68■■■□□ 2.18
Trim6Q8BGE7 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC28.66■■■□□ 2.18
Trim6Q8BGE7 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC28.65■■■□□ 2.18
Trim6Q8BGE7 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
Trim6Q8BGE7 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
Trim6Q8BGE7 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
Trim6Q8BGE7 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC28.59■■■□□ 2.17
Trim6Q8BGE7 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC28.58■■■□□ 2.17
Trim6Q8BGE7 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
Trim6Q8BGE7 Gm25238-201ENSMUST00000174914 89 ntBASIC28.55■■■□□ 2.16
Trim6Q8BGE7 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
Trim6Q8BGE7 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
Trim6Q8BGE7 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC28.49■■■□□ 2.15
Trim6Q8BGE7 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC28.48■■■□□ 2.15
Trim6Q8BGE7 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
Trim6Q8BGE7 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC28.43■■■□□ 2.14
Trim6Q8BGE7 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
Trim6Q8BGE7 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
Trim6Q8BGE7 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC28.41■■■□□ 2.14
Trim6Q8BGE7 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC28.39■■■□□ 2.14
Trim6Q8BGE7 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
Trim6Q8BGE7 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC28.33■■■□□ 2.13
Trim6Q8BGE7 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
Trim6Q8BGE7 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
Trim6Q8BGE7 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
Trim6Q8BGE7 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
Trim6Q8BGE7 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
Trim6Q8BGE7 AC153504.1-201ENSMUST00000218379 2290 ntBASIC28.14■■■□□ 2.1
Trim6Q8BGE7 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC28.14■■■□□ 2.09
Trim6Q8BGE7 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC28.12■■■□□ 2.09
Trim6Q8BGE7 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC28.12■■■□□ 2.09
Trim6Q8BGE7 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC28.12■■■□□ 2.09
Trim6Q8BGE7 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
Trim6Q8BGE7 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC28.1■■■□□ 2.09
Trim6Q8BGE7 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC28.09■■■□□ 2.09
Trim6Q8BGE7 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
Trim6Q8BGE7 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC28.06■■■□□ 2.08
Trim6Q8BGE7 Zfp131-207ENSMUST00000224946 1783 ntBASIC28.03■■■□□ 2.08
Trim6Q8BGE7 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC27.95■■■□□ 2.06
Trim6Q8BGE7 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.06
Trim6Q8BGE7 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.06
Trim6Q8BGE7 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC27.88■■■□□ 2.05
Trim6Q8BGE7 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC27.88■■■□□ 2.05
Trim6Q8BGE7 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC27.87■■■□□ 2.05
Trim6Q8BGE7 Zxda-201ENSMUST00000117281 2621 ntBASIC27.86■■■□□ 2.05
Trim6Q8BGE7 Rab21-202ENSMUST00000218831 843 ntBASIC27.83■■■□□ 2.05
Trim6Q8BGE7 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
Trim6Q8BGE7 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC27.82■■■□□ 2.04
Trim6Q8BGE7 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
Trim6Q8BGE7 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC27.79■■■□□ 2.04
Trim6Q8BGE7 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC27.78■■■□□ 2.04
Trim6Q8BGE7 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC27.78■■■□□ 2.04
Trim6Q8BGE7 Gm2415-204ENSMUST00000190235 2004 ntBASIC27.78■■■□□ 2.04
Trim6Q8BGE7 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
Trim6Q8BGE7 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC27.77■■■□□ 2.04
Trim6Q8BGE7 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
Trim6Q8BGE7 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC27.75■■■□□ 2.03
Trim6Q8BGE7 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
Trim6Q8BGE7 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC27.74■■■□□ 2.03
Trim6Q8BGE7 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC27.71■■■□□ 2.03
Trim6Q8BGE7 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC27.71■■■□□ 2.03
Trim6Q8BGE7 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC27.7■■■□□ 2.03
Trim6Q8BGE7 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC27.7■■■□□ 2.02
Trim6Q8BGE7 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
Trim6Q8BGE7 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC27.66■■■□□ 2.02
Trim6Q8BGE7 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC27.65■■■□□ 2.02
Trim6Q8BGE7 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.02
Trim6Q8BGE7 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC27.64■■■□□ 2.01
Trim6Q8BGE7 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC27.62■■■□□ 2.01
Trim6Q8BGE7 Gm6658-202ENSMUST00000209493 1885 ntBASIC27.61■■■□□ 2.01
Trim6Q8BGE7 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC27.6■■■□□ 2.01
Trim6Q8BGE7 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC27.59■■■□□ 2.01
Trim6Q8BGE7 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
Trim6Q8BGE7 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC27.56■■■□□ 2
Trim6Q8BGE7 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC27.56■■■□□ 2
Trim6Q8BGE7 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC27.56■■■□□ 2
Trim6Q8BGE7 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC27.55■■■□□ 2
Trim6Q8BGE7 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC27.55■■■□□ 2
Trim6Q8BGE7 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC27.53■■■□□ 2
Trim6Q8BGE7 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC27.51■■□□□ 1.99
Trim6Q8BGE7 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
Trim6Q8BGE7 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC27.5■■□□□ 1.99
Trim6Q8BGE7 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
Trim6Q8BGE7 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC27.49■■□□□ 1.99
Trim6Q8BGE7 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC27.48■■□□□ 1.99
Trim6Q8BGE7 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC27.46■■□□□ 1.99
Trim6Q8BGE7 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
Trim6Q8BGE7 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
Trim6Q8BGE7 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.99
Trim6Q8BGE7 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms