Protein–RNA interactions for Protein: Q810I2

Trim50, E3 ubiquitin-protein ligase TRIM50, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50Q810I2 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC26.96■■□□□ 1.91
Trim50Q810I2 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC26.95■■□□□ 1.9
Trim50Q810I2 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC26.94■■□□□ 1.9
Trim50Q810I2 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC26.85■■□□□ 1.89
Trim50Q810I2 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
Trim50Q810I2 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC26.84■■□□□ 1.89
Trim50Q810I2 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
Trim50Q810I2 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
Trim50Q810I2 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
Trim50Q810I2 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC26.75■■□□□ 1.87
Trim50Q810I2 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
Trim50Q810I2 Gm25262-201ENSMUST00000174934 133 ntBASIC26.71■■□□□ 1.87
Trim50Q810I2 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC26.67■■□□□ 1.86
Trim50Q810I2 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC26.65■■□□□ 1.86
Trim50Q810I2 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
Trim50Q810I2 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC26.62■■□□□ 1.85
Trim50Q810I2 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
Trim50Q810I2 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
Trim50Q810I2 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Trim50Q810I2 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC26.57■■□□□ 1.84
Trim50Q810I2 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC26.57■■□□□ 1.84
Trim50Q810I2 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC26.53■■□□□ 1.84
Trim50Q810I2 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
Trim50Q810I2 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
Trim50Q810I2 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
Trim50Q810I2 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
Trim50Q810I2 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Trim50Q810I2 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
Trim50Q810I2 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC26.44■■□□□ 1.82
Trim50Q810I2 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC26.43■■□□□ 1.82
Trim50Q810I2 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Trim50Q810I2 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC26.41■■□□□ 1.82
Trim50Q810I2 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
Trim50Q810I2 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC26.37■■□□□ 1.81
Trim50Q810I2 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Trim50Q810I2 Zfp131-207ENSMUST00000224946 1783 ntBASIC26.36■■□□□ 1.81
Trim50Q810I2 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
Trim50Q810I2 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC26.31■■□□□ 1.8
Trim50Q810I2 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Trim50Q810I2 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC26.24■■□□□ 1.79
Trim50Q810I2 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC26.23■■□□□ 1.79
Trim50Q810I2 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
Trim50Q810I2 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC26.18■■□□□ 1.78
Trim50Q810I2 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Trim50Q810I2 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC26.17■■□□□ 1.78
Trim50Q810I2 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC26.17■■□□□ 1.78
Trim50Q810I2 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
Trim50Q810I2 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Trim50Q810I2 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC26.11■■□□□ 1.77
Trim50Q810I2 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Trim50Q810I2 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
Trim50Q810I2 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC26.08■■□□□ 1.77
Trim50Q810I2 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Trim50Q810I2 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
Trim50Q810I2 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Trim50Q810I2 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
Trim50Q810I2 AL845457.1-201ENSMUST00000197244 68 ntBASIC26■■□□□ 1.75
Trim50Q810I2 Gm17082-201ENSMUST00000166043 1091 ntBASIC25.98■■□□□ 1.75
Trim50Q810I2 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
Trim50Q810I2 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
Trim50Q810I2 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.75
Trim50Q810I2 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
Trim50Q810I2 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
Trim50Q810I2 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC25.92■■□□□ 1.74
Trim50Q810I2 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
Trim50Q810I2 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
Trim50Q810I2 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC25.92■■□□□ 1.74
Trim50Q810I2 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC25.9■■□□□ 1.74
Trim50Q810I2 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
Trim50Q810I2 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC25.85■■□□□ 1.73
Trim50Q810I2 Gm26115-201ENSMUST00000175605 87 ntBASIC25.85■■□□□ 1.73
Trim50Q810I2 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC25.85■■□□□ 1.73
Trim50Q810I2 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
Trim50Q810I2 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC25.84■■□□□ 1.73
Trim50Q810I2 Gm27322-201ENSMUST00000184007 104 ntBASIC25.84■■□□□ 1.73
Trim50Q810I2 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC25.82■■□□□ 1.72
Trim50Q810I2 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC25.81■■□□□ 1.72
Trim50Q810I2 Gm8109-201ENSMUST00000194076 746 ntBASIC25.8■■□□□ 1.72
Trim50Q810I2 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
Trim50Q810I2 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC25.79■■□□□ 1.72
Trim50Q810I2 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC25.76■■□□□ 1.72
Trim50Q810I2 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
Trim50Q810I2 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC25.72■■□□□ 1.71
Trim50Q810I2 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
Trim50Q810I2 Mipep-204ENSMUST00000225043 1548 ntBASIC25.7■■□□□ 1.7
Trim50Q810I2 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
Trim50Q810I2 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC25.68■■□□□ 1.7
Trim50Q810I2 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC25.68■■□□□ 1.7
Trim50Q810I2 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Trim50Q810I2 AC166822.3-201ENSMUST00000227394 661 ntBASIC25.65■■□□□ 1.7
Trim50Q810I2 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC25.64■■□□□ 1.7
Trim50Q810I2 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
Trim50Q810I2 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC25.62■■□□□ 1.69
Trim50Q810I2 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
Trim50Q810I2 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC25.56■■□□□ 1.68
Trim50Q810I2 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
Trim50Q810I2 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC25.53■■□□□ 1.68
Trim50Q810I2 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC25.52■■□□□ 1.68
Trim50Q810I2 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
Trim50Q810I2 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC25.5■■□□□ 1.67
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms