Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC28.84■■■□□ 2.21
Prpf38bQ80SY5 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
Prpf38bQ80SY5 Gm27322-201ENSMUST00000184007 104 ntBASIC28.83■■■□□ 2.21
Prpf38bQ80SY5 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC28.83■■■□□ 2.21
Prpf38bQ80SY5 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC28.82■■■□□ 2.2
Prpf38bQ80SY5 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC28.82■■■□□ 2.2
Prpf38bQ80SY5 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC28.78■■■□□ 2.2
Prpf38bQ80SY5 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
Prpf38bQ80SY5 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
Prpf38bQ80SY5 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC28.72■■■□□ 2.19
Prpf38bQ80SY5 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.19
Prpf38bQ80SY5 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.18
Prpf38bQ80SY5 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
Prpf38bQ80SY5 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC28.66■■■□□ 2.18
Prpf38bQ80SY5 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
Prpf38bQ80SY5 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
Prpf38bQ80SY5 Gm42596-201ENSMUST00000196305 1958 ntBASIC28.63■■■□□ 2.17
Prpf38bQ80SY5 Gm10524-201ENSMUST00000181931 1893 ntBASIC28.63■■■□□ 2.17
Prpf38bQ80SY5 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
Prpf38bQ80SY5 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
Prpf38bQ80SY5 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC28.56■■■□□ 2.16
Prpf38bQ80SY5 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC28.56■■■□□ 2.16
Prpf38bQ80SY5 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC28.49■■■□□ 2.15
Prpf38bQ80SY5 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
Prpf38bQ80SY5 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
Prpf38bQ80SY5 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC28.45■■■□□ 2.14
Prpf38bQ80SY5 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
Prpf38bQ80SY5 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC28.41■■■□□ 2.14
Prpf38bQ80SY5 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
Prpf38bQ80SY5 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
Prpf38bQ80SY5 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
Prpf38bQ80SY5 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC28.38■■■□□ 2.13
Prpf38bQ80SY5 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC28.38■■■□□ 2.13
Prpf38bQ80SY5 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC28.37■■■□□ 2.13
Prpf38bQ80SY5 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
Prpf38bQ80SY5 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
Prpf38bQ80SY5 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC28.35■■■□□ 2.13
Prpf38bQ80SY5 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC28.33■■■□□ 2.13
Prpf38bQ80SY5 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC28.29■■■□□ 2.12
Prpf38bQ80SY5 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC28.28■■■□□ 2.12
Prpf38bQ80SY5 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
Prpf38bQ80SY5 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
Prpf38bQ80SY5 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC28.22■■■□□ 2.11
Prpf38bQ80SY5 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC28.19■■■□□ 2.1
Prpf38bQ80SY5 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
Prpf38bQ80SY5 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC28.13■■■□□ 2.09
Prpf38bQ80SY5 CT025624.2-201ENSMUST00000223609 1909 ntBASIC28.12■■■□□ 2.09
Prpf38bQ80SY5 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC28.12■■■□□ 2.09
Prpf38bQ80SY5 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
Prpf38bQ80SY5 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
Prpf38bQ80SY5 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC28.08■■■□□ 2.09
Prpf38bQ80SY5 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC28.06■■■□□ 2.08
Prpf38bQ80SY5 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
Prpf38bQ80SY5 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC28.02■■■□□ 2.08
Prpf38bQ80SY5 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC28■■■□□ 2.07
Prpf38bQ80SY5 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC27.96■■■□□ 2.07
Prpf38bQ80SY5 Tdp2-203ENSMUST00000223804 1136 ntBASIC27.94■■■□□ 2.06
Prpf38bQ80SY5 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC27.94■■■□□ 2.06
Prpf38bQ80SY5 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC27.93■■■□□ 2.06
Prpf38bQ80SY5 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC27.91■■■□□ 2.06
Prpf38bQ80SY5 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC27.9■■■□□ 2.06
Prpf38bQ80SY5 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC27.9■■■□□ 2.06
Prpf38bQ80SY5 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC27.82■■■□□ 2.04
Prpf38bQ80SY5 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC27.8■■■□□ 2.04
Prpf38bQ80SY5 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC27.79■■■□□ 2.04
Prpf38bQ80SY5 AC166822.3-201ENSMUST00000227394 661 ntBASIC27.76■■■□□ 2.03
Prpf38bQ80SY5 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC27.75■■■□□ 2.03
Prpf38bQ80SY5 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
Prpf38bQ80SY5 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
Prpf38bQ80SY5 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC27.72■■■□□ 2.03
Prpf38bQ80SY5 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC27.72■■■□□ 2.03
Prpf38bQ80SY5 Gm16148-201ENSMUST00000119653 893 ntBASIC27.7■■■□□ 2.02
Prpf38bQ80SY5 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC27.69■■■□□ 2.02
Prpf38bQ80SY5 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC27.68■■■□□ 2.02
Prpf38bQ80SY5 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC27.67■■■□□ 2.02
Prpf38bQ80SY5 Gm5987-201ENSMUST00000196433 1151 ntBASIC27.67■■■□□ 2.02
Prpf38bQ80SY5 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC27.65■■■□□ 2.02
Prpf38bQ80SY5 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.02
Prpf38bQ80SY5 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
Prpf38bQ80SY5 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC27.61■■■□□ 2.01
Prpf38bQ80SY5 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC27.6■■■□□ 2.01
Prpf38bQ80SY5 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
Prpf38bQ80SY5 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
Prpf38bQ80SY5 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC27.54■■■□□ 2
Prpf38bQ80SY5 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC27.54■■■□□ 2
Prpf38bQ80SY5 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC27.52■■■□□ 2
Prpf38bQ80SY5 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
Prpf38bQ80SY5 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC27.5■■□□□ 1.99
Prpf38bQ80SY5 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC27.49■■□□□ 1.99
Prpf38bQ80SY5 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
Prpf38bQ80SY5 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC27.48■■□□□ 1.99
Prpf38bQ80SY5 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC27.48■■□□□ 1.99
Prpf38bQ80SY5 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC27.48■■□□□ 1.99
Prpf38bQ80SY5 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC27.46■■□□□ 1.99
Prpf38bQ80SY5 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
Prpf38bQ80SY5 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC27.43■■□□□ 1.98
Prpf38bQ80SY5 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
Prpf38bQ80SY5 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
Prpf38bQ80SY5 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC27.4■■□□□ 1.98
Prpf38bQ80SY5 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC27.39■■□□□ 1.98
Retrieved 100 of 76,532 protein–RNA pairs in 9.2 ms