Protein–RNA interactions for Protein: Q6T3U4

Npc1l1, Niemann-Pick C1-like protein 1, mousemouse

Predictions only

Length 1,333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1l1Q6T3U4 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC34.02■■■■□ 3.04
Npc1l1Q6T3U4 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC33.95■■■■□ 3.03
Npc1l1Q6T3U4 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC33.94■■■■□ 3.02
Npc1l1Q6T3U4 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC33.9■■■■□ 3.02
Npc1l1Q6T3U4 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC33.86■■■■□ 3.01
Npc1l1Q6T3U4 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC33.86■■■■□ 3.01
Npc1l1Q6T3U4 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC33.79■■■■□ 3
Npc1l1Q6T3U4 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC33.74■■■□□ 2.99
Npc1l1Q6T3U4 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC33.71■■■□□ 2.99
Npc1l1Q6T3U4 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC33.68■■■□□ 2.98
Npc1l1Q6T3U4 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC33.66■■■□□ 2.98
Npc1l1Q6T3U4 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC33.65■■■□□ 2.98
Npc1l1Q6T3U4 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC33.65■■■□□ 2.98
Npc1l1Q6T3U4 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC33.64■■■□□ 2.98
Npc1l1Q6T3U4 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC33.62■■■□□ 2.97
Npc1l1Q6T3U4 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC33.59■■■□□ 2.97
Npc1l1Q6T3U4 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC33.56■■■□□ 2.96
Npc1l1Q6T3U4 Gm17082-201ENSMUST00000166043 1091 ntBASIC33.54■■■□□ 2.96
Npc1l1Q6T3U4 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC33.53■■■□□ 2.96
Npc1l1Q6T3U4 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC33.52■■■□□ 2.96
Npc1l1Q6T3U4 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC33.47■■■□□ 2.95
Npc1l1Q6T3U4 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC33.45■■■□□ 2.95
Npc1l1Q6T3U4 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC33.43■■■□□ 2.94
Npc1l1Q6T3U4 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC33.39■■■□□ 2.94
Npc1l1Q6T3U4 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC33.35■■■□□ 2.93
Npc1l1Q6T3U4 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC33.35■■■□□ 2.93
Npc1l1Q6T3U4 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC33.34■■■□□ 2.93
Npc1l1Q6T3U4 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC33.32■■■□□ 2.92
Npc1l1Q6T3U4 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC33.27■■■□□ 2.92
Npc1l1Q6T3U4 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC33.26■■■□□ 2.91
Npc1l1Q6T3U4 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC33.26■■■□□ 2.91
Npc1l1Q6T3U4 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC33.24■■■□□ 2.91
Npc1l1Q6T3U4 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC33.22■■■□□ 2.91
Npc1l1Q6T3U4 Gm27322-201ENSMUST00000184007 104 ntBASIC33.22■■■□□ 2.91
Npc1l1Q6T3U4 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC33.21■■■□□ 2.91
Npc1l1Q6T3U4 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC33.18■■■□□ 2.9
Npc1l1Q6T3U4 Gm24804-201ENSMUST00000174982 85 ntBASIC33.16■■■□□ 2.9
Npc1l1Q6T3U4 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC33.12■■■□□ 2.89
Npc1l1Q6T3U4 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC33.09■■■□□ 2.89
Npc1l1Q6T3U4 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC33.09■■■□□ 2.89
Npc1l1Q6T3U4 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC33.07■■■□□ 2.88
Npc1l1Q6T3U4 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC33■■■□□ 2.87
Npc1l1Q6T3U4 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC32.98■■■□□ 2.87
Npc1l1Q6T3U4 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC32.97■■■□□ 2.87
Npc1l1Q6T3U4 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC32.96■■■□□ 2.87
Npc1l1Q6T3U4 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC32.94■■■□□ 2.86
Npc1l1Q6T3U4 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC32.92■■■□□ 2.86
Npc1l1Q6T3U4 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC32.92■■■□□ 2.86
Npc1l1Q6T3U4 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC32.87■■■□□ 2.85
Npc1l1Q6T3U4 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC32.86■■■□□ 2.85
Npc1l1Q6T3U4 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC32.84■■■□□ 2.85
Npc1l1Q6T3U4 Zfp131-207ENSMUST00000224946 1783 ntBASIC32.83■■■□□ 2.85
Npc1l1Q6T3U4 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC32.8■■■□□ 2.84
Npc1l1Q6T3U4 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC32.78■■■□□ 2.84
Npc1l1Q6T3U4 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC32.72■■■□□ 2.83
Npc1l1Q6T3U4 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC32.63■■■□□ 2.81
Npc1l1Q6T3U4 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC32.61■■■□□ 2.81
Npc1l1Q6T3U4 AL845457.1-201ENSMUST00000197244 68 ntBASIC32.6■■■□□ 2.81
Npc1l1Q6T3U4 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC32.59■■■□□ 2.81
Npc1l1Q6T3U4 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC32.59■■■□□ 2.81
Npc1l1Q6T3U4 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC32.58■■■□□ 2.81
Npc1l1Q6T3U4 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC32.58■■■□□ 2.81
Npc1l1Q6T3U4 AC166822.3-201ENSMUST00000227394 661 ntBASIC32.56■■■□□ 2.8
Npc1l1Q6T3U4 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC32.56■■■□□ 2.8
Npc1l1Q6T3U4 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC32.56■■■□□ 2.8
Npc1l1Q6T3U4 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC32.55■■■□□ 2.8
Npc1l1Q6T3U4 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC32.55■■■□□ 2.8
Npc1l1Q6T3U4 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC32.53■■■□□ 2.8
Npc1l1Q6T3U4 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC32.52■■■□□ 2.8
Npc1l1Q6T3U4 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
Npc1l1Q6T3U4 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC32.49■■■□□ 2.79
Npc1l1Q6T3U4 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC32.47■■■□□ 2.79
Npc1l1Q6T3U4 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC32.45■■■□□ 2.78
Npc1l1Q6T3U4 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC32.44■■■□□ 2.78
Npc1l1Q6T3U4 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC32.41■■■□□ 2.78
Npc1l1Q6T3U4 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC32.4■■■□□ 2.78
Npc1l1Q6T3U4 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC32.4■■■□□ 2.78
Npc1l1Q6T3U4 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC32.4■■■□□ 2.78
Npc1l1Q6T3U4 Zfp131-205ENSMUST00000223812 663 ntBASIC32.4■■■□□ 2.78
Npc1l1Q6T3U4 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC32.4■■■□□ 2.78
Npc1l1Q6T3U4 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC32.38■■■□□ 2.77
Npc1l1Q6T3U4 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC32.38■■■□□ 2.77
Npc1l1Q6T3U4 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC32.36■■■□□ 2.77
Npc1l1Q6T3U4 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC32.36■■■□□ 2.77
Npc1l1Q6T3U4 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC32.36■■■□□ 2.77
Npc1l1Q6T3U4 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC32.26■■■□□ 2.75
Npc1l1Q6T3U4 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC32.26■■■□□ 2.75
Npc1l1Q6T3U4 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC32.25■■■□□ 2.75
Npc1l1Q6T3U4 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC32.2■■■□□ 2.75
Npc1l1Q6T3U4 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC32.19■■■□□ 2.74
Npc1l1Q6T3U4 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC32.18■■■□□ 2.74
Npc1l1Q6T3U4 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC32.18■■■□□ 2.74
Npc1l1Q6T3U4 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC32.17■■■□□ 2.74
Npc1l1Q6T3U4 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC32.16■■■□□ 2.74
Npc1l1Q6T3U4 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC32.15■■■□□ 2.74
Npc1l1Q6T3U4 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC32.13■■■□□ 2.73
Npc1l1Q6T3U4 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC32.13■■■□□ 2.73
Npc1l1Q6T3U4 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC32.12■■■□□ 2.73
Npc1l1Q6T3U4 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC32.06■■■□□ 2.72
Npc1l1Q6T3U4 Mipep-204ENSMUST00000225043 1548 ntBASIC32.06■■■□□ 2.72
Retrieved 100 of 76,532 protein–RNA pairs in 87.9 ms