Protein–RNA interactions for Protein: Q6T3U4

Npc1l1, Niemann-Pick C1-like protein 1, mousemouse

Predictions only

Length 1,333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1l1Q6T3U4 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC34,02■■■■□ 3,04
Npc1l1Q6T3U4 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC33,95■■■■□ 3,03
Npc1l1Q6T3U4 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC33,94■■■■□ 3,02
Npc1l1Q6T3U4 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC33,9■■■■□ 3,02
Npc1l1Q6T3U4 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC33,86■■■■□ 3,01
Npc1l1Q6T3U4 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC33,86■■■■□ 3,01
Npc1l1Q6T3U4 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC33,79■■■■□ 3
Npc1l1Q6T3U4 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC33,74■■■□□ 2,99
Npc1l1Q6T3U4 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC33,71■■■□□ 2,99
Npc1l1Q6T3U4 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC33,68■■■□□ 2,98
Npc1l1Q6T3U4 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC33,66■■■□□ 2,98
Npc1l1Q6T3U4 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC33,65■■■□□ 2,98
Npc1l1Q6T3U4 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC33,65■■■□□ 2,98
Npc1l1Q6T3U4 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC33,64■■■□□ 2,98
Npc1l1Q6T3U4 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC33,62■■■□□ 2,97
Npc1l1Q6T3U4 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC33,59■■■□□ 2,97
Npc1l1Q6T3U4 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC33,56■■■□□ 2,96
Npc1l1Q6T3U4 Gm17082-201ENSMUST00000166043 1091 ntBASIC33,54■■■□□ 2,96
Npc1l1Q6T3U4 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC33,53■■■□□ 2,96
Npc1l1Q6T3U4 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC33,52■■■□□ 2,96
Npc1l1Q6T3U4 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC33,47■■■□□ 2,95
Npc1l1Q6T3U4 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC33,45■■■□□ 2,95
Npc1l1Q6T3U4 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC33,43■■■□□ 2,94
Npc1l1Q6T3U4 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC33,39■■■□□ 2,94
Npc1l1Q6T3U4 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC33,35■■■□□ 2,93
Npc1l1Q6T3U4 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC33,35■■■□□ 2,93
Npc1l1Q6T3U4 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC33,34■■■□□ 2,93
Npc1l1Q6T3U4 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC33,32■■■□□ 2,92
Npc1l1Q6T3U4 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC33,27■■■□□ 2,92
Npc1l1Q6T3U4 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC33,26■■■□□ 2,91
Npc1l1Q6T3U4 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC33,26■■■□□ 2,91
Npc1l1Q6T3U4 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC33,24■■■□□ 2,91
Npc1l1Q6T3U4 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC33,22■■■□□ 2,91
Npc1l1Q6T3U4 Gm27322-201ENSMUST00000184007 104 ntBASIC33,22■■■□□ 2,91
Npc1l1Q6T3U4 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC33,21■■■□□ 2,91
Npc1l1Q6T3U4 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC33,18■■■□□ 2,9
Npc1l1Q6T3U4 Gm24804-201ENSMUST00000174982 85 ntBASIC33,16■■■□□ 2,9
Npc1l1Q6T3U4 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC33,12■■■□□ 2,89
Npc1l1Q6T3U4 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC33,09■■■□□ 2,89
Npc1l1Q6T3U4 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC33,09■■■□□ 2,89
Npc1l1Q6T3U4 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC33,07■■■□□ 2,88
Npc1l1Q6T3U4 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC33■■■□□ 2,87
Npc1l1Q6T3U4 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC32,98■■■□□ 2,87
Npc1l1Q6T3U4 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC32,97■■■□□ 2,87
Npc1l1Q6T3U4 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC32,96■■■□□ 2,87
Npc1l1Q6T3U4 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC32,94■■■□□ 2,86
Npc1l1Q6T3U4 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC32,92■■■□□ 2,86
Npc1l1Q6T3U4 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC32,92■■■□□ 2,86
Npc1l1Q6T3U4 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC32,87■■■□□ 2,85
Npc1l1Q6T3U4 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC32,86■■■□□ 2,85
Npc1l1Q6T3U4 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC32,84■■■□□ 2,85
Npc1l1Q6T3U4 Zfp131-207ENSMUST00000224946 1783 ntBASIC32,83■■■□□ 2,85
Npc1l1Q6T3U4 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC32,8■■■□□ 2,84
Npc1l1Q6T3U4 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC32,78■■■□□ 2,84
Npc1l1Q6T3U4 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC32,72■■■□□ 2,83
Npc1l1Q6T3U4 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC32,63■■■□□ 2,81
Npc1l1Q6T3U4 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC32,61■■■□□ 2,81
Npc1l1Q6T3U4 AL845457.1-201ENSMUST00000197244 68 ntBASIC32,6■■■□□ 2,81
Npc1l1Q6T3U4 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC32,59■■■□□ 2,81
Npc1l1Q6T3U4 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC32,59■■■□□ 2,81
Npc1l1Q6T3U4 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC32,58■■■□□ 2,81
Npc1l1Q6T3U4 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC32,58■■■□□ 2,81
Npc1l1Q6T3U4 AC166822.3-201ENSMUST00000227394 661 ntBASIC32,56■■■□□ 2,8
Npc1l1Q6T3U4 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC32,56■■■□□ 2,8
Npc1l1Q6T3U4 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC32,56■■■□□ 2,8
Npc1l1Q6T3U4 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC32,55■■■□□ 2,8
Npc1l1Q6T3U4 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC32,55■■■□□ 2,8
Npc1l1Q6T3U4 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC32,53■■■□□ 2,8
Npc1l1Q6T3U4 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC32,52■■■□□ 2,8
Npc1l1Q6T3U4 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC32,5■■■□□ 2,79
Npc1l1Q6T3U4 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC32,49■■■□□ 2,79
Npc1l1Q6T3U4 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC32,47■■■□□ 2,79
Npc1l1Q6T3U4 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC32,45■■■□□ 2,78
Npc1l1Q6T3U4 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC32,44■■■□□ 2,78
Npc1l1Q6T3U4 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC32,41■■■□□ 2,78
Npc1l1Q6T3U4 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC32,4■■■□□ 2,78
Npc1l1Q6T3U4 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC32,4■■■□□ 2,78
Npc1l1Q6T3U4 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC32,4■■■□□ 2,78
Npc1l1Q6T3U4 Zfp131-205ENSMUST00000223812 663 ntBASIC32,4■■■□□ 2,78
Npc1l1Q6T3U4 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC32,4■■■□□ 2,78
Npc1l1Q6T3U4 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC32,38■■■□□ 2,77
Npc1l1Q6T3U4 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC32,38■■■□□ 2,77
Npc1l1Q6T3U4 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC32,36■■■□□ 2,77
Npc1l1Q6T3U4 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC32,36■■■□□ 2,77
Npc1l1Q6T3U4 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC32,36■■■□□ 2,77
Npc1l1Q6T3U4 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC32,26■■■□□ 2,75
Npc1l1Q6T3U4 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC32,26■■■□□ 2,75
Npc1l1Q6T3U4 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC32,25■■■□□ 2,75
Npc1l1Q6T3U4 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC32,2■■■□□ 2,75
Npc1l1Q6T3U4 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC32,19■■■□□ 2,74
Npc1l1Q6T3U4 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC32,18■■■□□ 2,74
Npc1l1Q6T3U4 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC32,18■■■□□ 2,74
Npc1l1Q6T3U4 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC32,17■■■□□ 2,74
Npc1l1Q6T3U4 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC32,16■■■□□ 2,74
Npc1l1Q6T3U4 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC32,15■■■□□ 2,74
Npc1l1Q6T3U4 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC32,13■■■□□ 2,73
Npc1l1Q6T3U4 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC32,13■■■□□ 2,73
Npc1l1Q6T3U4 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC32,12■■■□□ 2,73
Npc1l1Q6T3U4 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC32,06■■■□□ 2,72
Npc1l1Q6T3U4 Mipep-204ENSMUST00000225043 1548 ntBASIC32,06■■■□□ 2,72
Retrieved 100 of 76,532 protein–RNA pairs in 11,2 ms