Protein–RNA interactions for Protein: Q6IFX3

Krt40, Keratin, type I cytoskeletal 40, mousemouse

Predictions only

Length 439 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt40Q6IFX3 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC33.56■■■□□ 2.96
Krt40Q6IFX3 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC33.56■■■□□ 2.96
Krt40Q6IFX3 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC33.53■■■□□ 2.96
Krt40Q6IFX3 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC33.53■■■□□ 2.96
Krt40Q6IFX3 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC33.51■■■□□ 2.95
Krt40Q6IFX3 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC33.48■■■□□ 2.95
Krt40Q6IFX3 Gm8109-201ENSMUST00000194076 746 ntBASIC33.44■■■□□ 2.94
Krt40Q6IFX3 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC33.44■■■□□ 2.94
Krt40Q6IFX3 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC33.43■■■□□ 2.94
Krt40Q6IFX3 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC33.41■■■□□ 2.94
Krt40Q6IFX3 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC33.41■■■□□ 2.94
Krt40Q6IFX3 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC33.38■■■□□ 2.93
Krt40Q6IFX3 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC33.35■■■□□ 2.93
Krt40Q6IFX3 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC33.33■■■□□ 2.93
Krt40Q6IFX3 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC33.29■■■□□ 2.92
Krt40Q6IFX3 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC33.23■■■□□ 2.91
Krt40Q6IFX3 Gm17082-201ENSMUST00000166043 1091 ntBASIC33.22■■■□□ 2.91
Krt40Q6IFX3 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC33.22■■■□□ 2.91
Krt40Q6IFX3 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC33.19■■■□□ 2.9
Krt40Q6IFX3 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC33.17■■■□□ 2.9
Krt40Q6IFX3 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC33.14■■■□□ 2.9
Krt40Q6IFX3 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC33.13■■■□□ 2.89
Krt40Q6IFX3 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC33.11■■■□□ 2.89
Krt40Q6IFX3 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC33.09■■■□□ 2.89
Krt40Q6IFX3 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC33.08■■■□□ 2.89
Krt40Q6IFX3 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC33.04■■■□□ 2.88
Krt40Q6IFX3 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC33■■■□□ 2.87
Krt40Q6IFX3 Gm27322-201ENSMUST00000184007 104 ntBASIC32.97■■■□□ 2.87
Krt40Q6IFX3 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC32.93■■■□□ 2.86
Krt40Q6IFX3 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC32.9■■■□□ 2.86
Krt40Q6IFX3 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC32.82■■■□□ 2.84
Krt40Q6IFX3 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC32.82■■■□□ 2.84
Krt40Q6IFX3 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC32.78■■■□□ 2.84
Krt40Q6IFX3 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC32.75■■■□□ 2.83
Krt40Q6IFX3 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC32.71■■■□□ 2.83
Krt40Q6IFX3 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC32.7■■■□□ 2.83
Krt40Q6IFX3 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC32.69■■■□□ 2.82
Krt40Q6IFX3 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC32.69■■■□□ 2.82
Krt40Q6IFX3 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC32.68■■■□□ 2.82
Krt40Q6IFX3 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC32.66■■■□□ 2.82
Krt40Q6IFX3 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC32.66■■■□□ 2.82
Krt40Q6IFX3 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC32.66■■■□□ 2.82
Krt40Q6IFX3 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC32.63■■■□□ 2.81
Krt40Q6IFX3 Zfp131-207ENSMUST00000224946 1783 ntBASIC32.61■■■□□ 2.81
Krt40Q6IFX3 AL845457.1-201ENSMUST00000197244 68 ntBASIC32.6■■■□□ 2.81
Krt40Q6IFX3 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC32.59■■■□□ 2.81
Krt40Q6IFX3 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC32.55■■■□□ 2.8
Krt40Q6IFX3 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC32.54■■■□□ 2.8
Krt40Q6IFX3 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC32.52■■■□□ 2.8
Krt40Q6IFX3 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC32.48■■■□□ 2.79
Krt40Q6IFX3 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC32.48■■■□□ 2.79
Krt40Q6IFX3 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC32.47■■■□□ 2.79
Krt40Q6IFX3 Gm24804-201ENSMUST00000174982 85 ntBASIC32.45■■■□□ 2.79
Krt40Q6IFX3 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC32.45■■■□□ 2.78
Krt40Q6IFX3 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC32.44■■■□□ 2.78
Krt40Q6IFX3 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC32.44■■■□□ 2.78
Krt40Q6IFX3 AC166822.3-201ENSMUST00000227394 661 ntBASIC32.44■■■□□ 2.78
Krt40Q6IFX3 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC32.39■■■□□ 2.78
Krt40Q6IFX3 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC32.38■■■□□ 2.77
Krt40Q6IFX3 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC32.38■■■□□ 2.77
Krt40Q6IFX3 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC32.33■■■□□ 2.77
Krt40Q6IFX3 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC32.31■■■□□ 2.76
Krt40Q6IFX3 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC32.29■■■□□ 2.76
Krt40Q6IFX3 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC32.29■■■□□ 2.76
Krt40Q6IFX3 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC32.28■■■□□ 2.76
Krt40Q6IFX3 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC32.17■■■□□ 2.74
Krt40Q6IFX3 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC32.1■■■□□ 2.73
Krt40Q6IFX3 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC32.09■■■□□ 2.73
Krt40Q6IFX3 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC32.09■■■□□ 2.73
Krt40Q6IFX3 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC32.05■■■□□ 2.72
Krt40Q6IFX3 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC32.04■■■□□ 2.72
Krt40Q6IFX3 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC32.02■■■□□ 2.72
Krt40Q6IFX3 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC32.01■■■□□ 2.72
Krt40Q6IFX3 Mipep-204ENSMUST00000225043 1548 ntBASIC31.97■■■□□ 2.71
Krt40Q6IFX3 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC31.97■■■□□ 2.71
Krt40Q6IFX3 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
Krt40Q6IFX3 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.71
Krt40Q6IFX3 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
Krt40Q6IFX3 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC31.94■■■□□ 2.7
Krt40Q6IFX3 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC31.92■■■□□ 2.7
Krt40Q6IFX3 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
Krt40Q6IFX3 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC31.91■■■□□ 2.7
Krt40Q6IFX3 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC31.9■■■□□ 2.7
Krt40Q6IFX3 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC31.89■■■□□ 2.7
Krt40Q6IFX3 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC31.89■■■□□ 2.7
Krt40Q6IFX3 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC31.88■■■□□ 2.69
Krt40Q6IFX3 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
Krt40Q6IFX3 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC31.86■■■□□ 2.69
Krt40Q6IFX3 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
Krt40Q6IFX3 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
Krt40Q6IFX3 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC31.84■■■□□ 2.69
Krt40Q6IFX3 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
Krt40Q6IFX3 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC31.78■■■□□ 2.68
Krt40Q6IFX3 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC31.78■■■□□ 2.68
Krt40Q6IFX3 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
Krt40Q6IFX3 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
Krt40Q6IFX3 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC31.71■■■□□ 2.67
Krt40Q6IFX3 Peli2-204ENSMUST00000226513 1320 ntBASIC31.71■■■□□ 2.67
Krt40Q6IFX3 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC31.7■■■□□ 2.67
Krt40Q6IFX3 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC31.69■■■□□ 2.66
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms