Protein–RNA interactions for Protein: Q64729

Tgfbr1, TGF-beta receptor type-1, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tgfbr1Q64729 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Tgfbr1Q64729 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC22.09■■□□□ 1.13
Tgfbr1Q64729 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC22.08■■□□□ 1.12
Tgfbr1Q64729 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Tgfbr1Q64729 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Tgfbr1Q64729 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC22.06■■□□□ 1.12
Tgfbr1Q64729 Gm25238-201ENSMUST00000174914 89 ntBASIC22.01■■□□□ 1.11
Tgfbr1Q64729 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
Tgfbr1Q64729 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Tgfbr1Q64729 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC21.95■■□□□ 1.11
Tgfbr1Q64729 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Tgfbr1Q64729 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Tgfbr1Q64729 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Tgfbr1Q64729 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC21.9■■□□□ 1.1
Tgfbr1Q64729 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC21.9■■□□□ 1.1
Tgfbr1Q64729 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC21.88■■□□□ 1.09
Tgfbr1Q64729 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
Tgfbr1Q64729 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC21.87■■□□□ 1.09
Tgfbr1Q64729 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Tgfbr1Q64729 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
Tgfbr1Q64729 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC21.82■■□□□ 1.08
Tgfbr1Q64729 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Tgfbr1Q64729 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Tgfbr1Q64729 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Tgfbr1Q64729 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC21.78■■□□□ 1.08
Tgfbr1Q64729 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC21.77■■□□□ 1.08
Tgfbr1Q64729 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Tgfbr1Q64729 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC21.72■■□□□ 1.07
Tgfbr1Q64729 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Tgfbr1Q64729 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Tgfbr1Q64729 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Tgfbr1Q64729 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Tgfbr1Q64729 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Tgfbr1Q64729 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
Tgfbr1Q64729 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
Tgfbr1Q64729 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC21.62■■□□□ 1.05
Tgfbr1Q64729 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Tgfbr1Q64729 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Tgfbr1Q64729 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.04
Tgfbr1Q64729 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC21.55■■□□□ 1.04
Tgfbr1Q64729 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
Tgfbr1Q64729 Zfp131-207ENSMUST00000224946 1783 ntBASIC21.54■■□□□ 1.04
Tgfbr1Q64729 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC21.47■■□□□ 1.03
Tgfbr1Q64729 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Tgfbr1Q64729 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Tgfbr1Q64729 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Tgfbr1Q64729 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Tgfbr1Q64729 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Tgfbr1Q64729 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Tgfbr1Q64729 Gm2415-204ENSMUST00000190235 2004 ntBASIC21.4■■□□□ 1.02
Tgfbr1Q64729 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Tgfbr1Q64729 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Tgfbr1Q64729 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Tgfbr1Q64729 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC21.37■■□□□ 1.01
Tgfbr1Q64729 Rab21-202ENSMUST00000218831 843 ntBASIC21.37■■□□□ 1.01
Tgfbr1Q64729 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Tgfbr1Q64729 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Tgfbr1Q64729 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Tgfbr1Q64729 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Tgfbr1Q64729 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
Tgfbr1Q64729 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC21.31■■□□□ 1
Tgfbr1Q64729 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC21.3■■□□□ 1
Tgfbr1Q64729 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Tgfbr1Q64729 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Tgfbr1Q64729 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC21.29■■□□□ 1
Tgfbr1Q64729 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Tgfbr1Q64729 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC21.28■■□□□ 1
Tgfbr1Q64729 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Tgfbr1Q64729 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Tgfbr1Q64729 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC21.27■■□□□ 1
Tgfbr1Q64729 AC153504.1-201ENSMUST00000218379 2290 ntBASIC21.27■■□□□ 1
Tgfbr1Q64729 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
Tgfbr1Q64729 Gm6658-202ENSMUST00000209493 1885 ntBASIC21.24■□□□□ 0.99
Tgfbr1Q64729 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Tgfbr1Q64729 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Tgfbr1Q64729 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC21.22■□□□□ 0.99
Tgfbr1Q64729 Zxda-201ENSMUST00000117281 2621 ntBASIC21.22■□□□□ 0.99
Tgfbr1Q64729 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
Tgfbr1Q64729 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Tgfbr1Q64729 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Tgfbr1Q64729 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Tgfbr1Q64729 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Tgfbr1Q64729 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Tgfbr1Q64729 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC21.15■□□□□ 0.98
Tgfbr1Q64729 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Tgfbr1Q64729 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Tgfbr1Q64729 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Tgfbr1Q64729 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC21.12■□□□□ 0.97
Tgfbr1Q64729 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Tgfbr1Q64729 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Tgfbr1Q64729 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Tgfbr1Q64729 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Tgfbr1Q64729 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC21.1■□□□□ 0.97
Tgfbr1Q64729 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Tgfbr1Q64729 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Tgfbr1Q64729 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Tgfbr1Q64729 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Tgfbr1Q64729 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Tgfbr1Q64729 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
Tgfbr1Q64729 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms