Protein–RNA interactions for Protein: Q64729

Tgfbr1, TGF-beta receptor type-1, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tgfbr1Q64729 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC22,11■■□□□ 1,13
Tgfbr1Q64729 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC22,09■■□□□ 1,13
Tgfbr1Q64729 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC22,08■■□□□ 1,12
Tgfbr1Q64729 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC22,07■■□□□ 1,12
Tgfbr1Q64729 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC22,06■■□□□ 1,12
Tgfbr1Q64729 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC22,06■■□□□ 1,12
Tgfbr1Q64729 Gm25238-201ENSMUST00000174914 89 ntBASIC22,01■■□□□ 1,11
Tgfbr1Q64729 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC21,97■■□□□ 1,11
Tgfbr1Q64729 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC21,97■■□□□ 1,11
Tgfbr1Q64729 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC21,95■■□□□ 1,11
Tgfbr1Q64729 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC21,95■■□□□ 1,1
Tgfbr1Q64729 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC21,94■■□□□ 1,1
Tgfbr1Q64729 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC21,9■■□□□ 1,1
Tgfbr1Q64729 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC21,9■■□□□ 1,1
Tgfbr1Q64729 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC21,9■■□□□ 1,1
Tgfbr1Q64729 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC21,88■■□□□ 1,09
Tgfbr1Q64729 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC21,87■■□□□ 1,09
Tgfbr1Q64729 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC21,87■■□□□ 1,09
Tgfbr1Q64729 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC21,85■■□□□ 1,09
Tgfbr1Q64729 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC21,82■■□□□ 1,08
Tgfbr1Q64729 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC21,82■■□□□ 1,08
Tgfbr1Q64729 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC21,8■■□□□ 1,08
Tgfbr1Q64729 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC21,8■■□□□ 1,08
Tgfbr1Q64729 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC21,8■■□□□ 1,08
Tgfbr1Q64729 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC21,78■■□□□ 1,08
Tgfbr1Q64729 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC21,77■■□□□ 1,08
Tgfbr1Q64729 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC21,77■■□□□ 1,08
Tgfbr1Q64729 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC21,72■■□□□ 1,07
Tgfbr1Q64729 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC21,71■■□□□ 1,07
Tgfbr1Q64729 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC21,7■■□□□ 1,06
Tgfbr1Q64729 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC21,7■■□□□ 1,06
Tgfbr1Q64729 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC21,66■■□□□ 1,06
Tgfbr1Q64729 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC21,66■■□□□ 1,06
Tgfbr1Q64729 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC21,65■■□□□ 1,06
Tgfbr1Q64729 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC21,62■■□□□ 1,05
Tgfbr1Q64729 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC21,62■■□□□ 1,05
Tgfbr1Q64729 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC21,61■■□□□ 1,05
Tgfbr1Q64729 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC21,59■■□□□ 1,05
Tgfbr1Q64729 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC21,58■■□□□ 1,04
Tgfbr1Q64729 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC21,55■■□□□ 1,04
Tgfbr1Q64729 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC21,55■■□□□ 1,04
Tgfbr1Q64729 Zfp131-207ENSMUST00000224946 1783 ntBASIC21,54■■□□□ 1,04
Tgfbr1Q64729 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC21,47■■□□□ 1,03
Tgfbr1Q64729 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC21,45■■□□□ 1,02
Tgfbr1Q64729 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC21,45■■□□□ 1,02
Tgfbr1Q64729 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC21,44■■□□□ 1,02
Tgfbr1Q64729 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC21,43■■□□□ 1,02
Tgfbr1Q64729 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC21,4■■□□□ 1,02
Tgfbr1Q64729 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC21,4■■□□□ 1,02
Tgfbr1Q64729 Gm2415-204ENSMUST00000190235 2004 ntBASIC21,4■■□□□ 1,02
Tgfbr1Q64729 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC21,39■■□□□ 1,02
Tgfbr1Q64729 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC21,38■■□□□ 1,01
Tgfbr1Q64729 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC21,38■■□□□ 1,01
Tgfbr1Q64729 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC21,37■■□□□ 1,01
Tgfbr1Q64729 Rab21-202ENSMUST00000218831 843 ntBASIC21,37■■□□□ 1,01
Tgfbr1Q64729 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC21,37■■□□□ 1,01
Tgfbr1Q64729 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC21,36■■□□□ 1,01
Tgfbr1Q64729 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC21,33■■□□□ 1,01
Tgfbr1Q64729 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC21,32■■□□□ 1
Tgfbr1Q64729 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC21,32■■□□□ 1
Tgfbr1Q64729 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC21,31■■□□□ 1
Tgfbr1Q64729 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC21,3■■□□□ 1
Tgfbr1Q64729 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC21,3■■□□□ 1
Tgfbr1Q64729 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC21,29■■□□□ 1
Tgfbr1Q64729 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC21,29■■□□□ 1
Tgfbr1Q64729 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC21,29■■□□□ 1
Tgfbr1Q64729 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC21,28■■□□□ 1
Tgfbr1Q64729 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC21,27■■□□□ 1
Tgfbr1Q64729 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC21,27■■□□□ 1
Tgfbr1Q64729 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC21,27■■□□□ 1
Tgfbr1Q64729 AC153504.1-201ENSMUST00000218379 2290 ntBASIC21,27■■□□□ 1
Tgfbr1Q64729 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC21,25■□□□□ 0,99
Tgfbr1Q64729 Gm6658-202ENSMUST00000209493 1885 ntBASIC21,24■□□□□ 0,99
Tgfbr1Q64729 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC21,24■□□□□ 0,99
Tgfbr1Q64729 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC21,23■□□□□ 0,99
Tgfbr1Q64729 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC21,22■□□□□ 0,99
Tgfbr1Q64729 Zxda-201ENSMUST00000117281 2621 ntBASIC21,22■□□□□ 0,99
Tgfbr1Q64729 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC21,21■□□□□ 0,99
Tgfbr1Q64729 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC21,2■□□□□ 0,98
Tgfbr1Q64729 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC21,2■□□□□ 0,98
Tgfbr1Q64729 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC21,19■□□□□ 0,98
Tgfbr1Q64729 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC21,18■□□□□ 0,98
Tgfbr1Q64729 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC21,16■□□□□ 0,98
Tgfbr1Q64729 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC21,15■□□□□ 0,98
Tgfbr1Q64729 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC21,14■□□□□ 0,98
Tgfbr1Q64729 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC21,12■□□□□ 0,97
Tgfbr1Q64729 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC21,12■□□□□ 0,97
Tgfbr1Q64729 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC21,12■□□□□ 0,97
Tgfbr1Q64729 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC21,12■□□□□ 0,97
Tgfbr1Q64729 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC21,11■□□□□ 0,97
Tgfbr1Q64729 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC21,11■□□□□ 0,97
Tgfbr1Q64729 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC21,11■□□□□ 0,97
Tgfbr1Q64729 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC21,1■□□□□ 0,97
Tgfbr1Q64729 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC21,1■□□□□ 0,97
Tgfbr1Q64729 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC21,08■□□□□ 0,97
Tgfbr1Q64729 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC21,08■□□□□ 0,96
Tgfbr1Q64729 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC21,06■□□□□ 0,96
Tgfbr1Q64729 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC21,06■□□□□ 0,96
Tgfbr1Q64729 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC21,06■□□□□ 0,96
Tgfbr1Q64729 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC21,06■□□□□ 0,96
Retrieved 100 of 76,532 protein–RNA pairs in 10,9 ms