Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC30.43■■■□□ 2.46
Ift88Q61371 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
Ift88Q61371 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC30.42■■■□□ 2.46
Ift88Q61371 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC30.34■■■□□ 2.45
Ift88Q61371 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
Ift88Q61371 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
Ift88Q61371 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
Ift88Q61371 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC30.31■■■□□ 2.44
Ift88Q61371 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
Ift88Q61371 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC30.27■■■□□ 2.44
Ift88Q61371 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC30.27■■■□□ 2.44
Ift88Q61371 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.42
Ift88Q61371 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC30.19■■■□□ 2.42
Ift88Q61371 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC30.14■■■□□ 2.42
Ift88Q61371 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
Ift88Q61371 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC30.12■■■□□ 2.41
Ift88Q61371 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
Ift88Q61371 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
Ift88Q61371 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
Ift88Q61371 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
Ift88Q61371 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC29.97■■■□□ 2.39
Ift88Q61371 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
Ift88Q61371 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
Ift88Q61371 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC29.96■■■□□ 2.39
Ift88Q61371 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC29.93■■■□□ 2.38
Ift88Q61371 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC29.92■■■□□ 2.38
Ift88Q61371 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC29.88■■■□□ 2.37
Ift88Q61371 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC29.88■■■□□ 2.37
Ift88Q61371 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC29.88■■■□□ 2.37
Ift88Q61371 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC29.87■■■□□ 2.37
Ift88Q61371 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
Ift88Q61371 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC29.82■■■□□ 2.36
Ift88Q61371 Zfp131-207ENSMUST00000224946 1783 ntBASIC29.82■■■□□ 2.36
Ift88Q61371 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC29.73■■■□□ 2.35
Ift88Q61371 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
Ift88Q61371 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
Ift88Q61371 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC29.69■■■□□ 2.34
Ift88Q61371 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC29.67■■■□□ 2.34
Ift88Q61371 Rab21-202ENSMUST00000218831 843 ntBASIC29.63■■■□□ 2.33
Ift88Q61371 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
Ift88Q61371 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC29.59■■■□□ 2.33
Ift88Q61371 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC29.58■■■□□ 2.33
Ift88Q61371 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC29.58■■■□□ 2.33
Ift88Q61371 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC29.56■■■□□ 2.32
Ift88Q61371 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC29.55■■■□□ 2.32
Ift88Q61371 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC29.54■■■□□ 2.32
Ift88Q61371 Gm2415-204ENSMUST00000190235 2004 ntBASIC29.52■■■□□ 2.32
Ift88Q61371 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
Ift88Q61371 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC29.5■■■□□ 2.31
Ift88Q61371 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC29.49■■■□□ 2.31
Ift88Q61371 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
Ift88Q61371 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC29.49■■■□□ 2.31
Ift88Q61371 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC29.46■■■□□ 2.31
Ift88Q61371 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC29.45■■■□□ 2.31
Ift88Q61371 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC29.45■■■□□ 2.31
Ift88Q61371 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC29.45■■■□□ 2.3
Ift88Q61371 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
Ift88Q61371 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC29.41■■■□□ 2.3
Ift88Q61371 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC29.4■■■□□ 2.3
Ift88Q61371 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC29.39■■■□□ 2.3
Ift88Q61371 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC29.36■■■□□ 2.29
Ift88Q61371 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC29.36■■■□□ 2.29
Ift88Q61371 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC29.34■■■□□ 2.29
Ift88Q61371 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
Ift88Q61371 Gm6658-202ENSMUST00000209493 1885 ntBASIC29.32■■■□□ 2.28
Ift88Q61371 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC29.3■■■□□ 2.28
Ift88Q61371 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
Ift88Q61371 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
Ift88Q61371 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC29.26■■■□□ 2.28
Ift88Q61371 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
Ift88Q61371 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
Ift88Q61371 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC29.23■■■□□ 2.27
Ift88Q61371 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC29.23■■■□□ 2.27
Ift88Q61371 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC29.22■■■□□ 2.27
Ift88Q61371 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
Ift88Q61371 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC29.22■■■□□ 2.27
Ift88Q61371 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC29.21■■■□□ 2.27
Ift88Q61371 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC29.21■■■□□ 2.27
Ift88Q61371 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC29.2■■■□□ 2.26
Ift88Q61371 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC29.19■■■□□ 2.26
Ift88Q61371 AC153504.1-201ENSMUST00000218379 2290 ntBASIC29.19■■■□□ 2.26
Ift88Q61371 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
Ift88Q61371 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
Ift88Q61371 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC29.12■■■□□ 2.25
Ift88Q61371 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC29.11■■■□□ 2.25
Ift88Q61371 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC29.09■■■□□ 2.25
Ift88Q61371 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC29.09■■■□□ 2.25
Ift88Q61371 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC29.08■■■□□ 2.25
Ift88Q61371 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC29.06■■■□□ 2.24
Ift88Q61371 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC29.05■■■□□ 2.24
Ift88Q61371 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC29.01■■■□□ 2.24
Ift88Q61371 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC29■■■□□ 2.23
Ift88Q61371 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC28.99■■■□□ 2.23
Ift88Q61371 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC28.98■■■□□ 2.23
Ift88Q61371 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC28.97■■■□□ 2.23
Ift88Q61371 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC28.95■■■□□ 2.22
Ift88Q61371 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC28.95■■■□□ 2.22
Ift88Q61371 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC28.94■■■□□ 2.22
Ift88Q61371 AL845457.1-201ENSMUST00000197244 68 ntBASIC28.93■■■□□ 2.22
Ift88Q61371 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC28.9■■■□□ 2.22
Retrieved 100 of 76,532 protein–RNA pairs in 172.3 ms