Protein–RNA interactions for Protein: Q60855

Ripk1, Receptor-interacting serine/threonine-protein kinase 1, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ripk1Q60855 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
Ripk1Q60855 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC25.91■■□□□ 1.74
Ripk1Q60855 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC25.89■■□□□ 1.74
Ripk1Q60855 Rab21-202ENSMUST00000218831 843 ntBASIC25.89■■□□□ 1.74
Ripk1Q60855 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
Ripk1Q60855 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC25.84■■□□□ 1.73
Ripk1Q60855 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.72
Ripk1Q60855 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC25.8■■□□□ 1.72
Ripk1Q60855 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
Ripk1Q60855 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
Ripk1Q60855 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC25.73■■□□□ 1.71
Ripk1Q60855 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
Ripk1Q60855 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC25.68■■□□□ 1.7
Ripk1Q60855 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC25.62■■□□□ 1.69
Ripk1Q60855 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Ripk1Q60855 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
Ripk1Q60855 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
Ripk1Q60855 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC25.58■■□□□ 1.68
Ripk1Q60855 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Ripk1Q60855 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
Ripk1Q60855 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC25.51■■□□□ 1.67
Ripk1Q60855 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC25.5■■□□□ 1.67
Ripk1Q60855 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
Ripk1Q60855 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC25.49■■□□□ 1.67
Ripk1Q60855 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
Ripk1Q60855 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC25.45■■□□□ 1.66
Ripk1Q60855 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC25.44■■□□□ 1.66
Ripk1Q60855 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC25.42■■□□□ 1.66
Ripk1Q60855 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC25.42■■□□□ 1.66
Ripk1Q60855 Gm25262-201ENSMUST00000174934 133 ntBASIC25.41■■□□□ 1.66
Ripk1Q60855 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC25.4■■□□□ 1.66
Ripk1Q60855 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
Ripk1Q60855 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
Ripk1Q60855 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC25.37■■□□□ 1.65
Ripk1Q60855 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
Ripk1Q60855 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC25.36■■□□□ 1.65
Ripk1Q60855 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
Ripk1Q60855 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Ripk1Q60855 Zfp131-207ENSMUST00000224946 1783 ntBASIC25.34■■□□□ 1.65
Ripk1Q60855 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Ripk1Q60855 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Ripk1Q60855 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Ripk1Q60855 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Ripk1Q60855 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC25.2■■□□□ 1.62
Ripk1Q60855 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC25.16■■□□□ 1.62
Ripk1Q60855 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC25.15■■□□□ 1.62
Ripk1Q60855 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
Ripk1Q60855 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
Ripk1Q60855 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC25.11■■□□□ 1.61
Ripk1Q60855 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Ripk1Q60855 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC25.1■■□□□ 1.61
Ripk1Q60855 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Ripk1Q60855 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Ripk1Q60855 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC25.07■■□□□ 1.6
Ripk1Q60855 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC25.06■■□□□ 1.6
Ripk1Q60855 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Ripk1Q60855 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
Ripk1Q60855 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC25.02■■□□□ 1.6
Ripk1Q60855 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Ripk1Q60855 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC24.99■■□□□ 1.59
Ripk1Q60855 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
Ripk1Q60855 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC24.96■■□□□ 1.59
Ripk1Q60855 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC24.96■■□□□ 1.59
Ripk1Q60855 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
Ripk1Q60855 AL845457.1-201ENSMUST00000197244 68 ntBASIC24.91■■□□□ 1.58
Ripk1Q60855 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC24.89■■□□□ 1.58
Ripk1Q60855 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
Ripk1Q60855 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC24.87■■□□□ 1.57
Ripk1Q60855 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
Ripk1Q60855 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC24.85■■□□□ 1.57
Ripk1Q60855 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
Ripk1Q60855 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
Ripk1Q60855 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
Ripk1Q60855 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC24.81■■□□□ 1.56
Ripk1Q60855 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC24.81■■□□□ 1.56
Ripk1Q60855 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
Ripk1Q60855 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC24.79■■□□□ 1.56
Ripk1Q60855 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC24.79■■□□□ 1.56
Ripk1Q60855 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Ripk1Q60855 Gm17082-201ENSMUST00000166043 1091 ntBASIC24.76■■□□□ 1.55
Ripk1Q60855 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Ripk1Q60855 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
Ripk1Q60855 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC24.72■■□□□ 1.55
Ripk1Q60855 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC24.71■■□□□ 1.55
Ripk1Q60855 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC24.7■■□□□ 1.55
Ripk1Q60855 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
Ripk1Q60855 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
Ripk1Q60855 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC24.69■■□□□ 1.54
Ripk1Q60855 Mipep-204ENSMUST00000225043 1548 ntBASIC24.68■■□□□ 1.54
Ripk1Q60855 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
Ripk1Q60855 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC24.67■■□□□ 1.54
Ripk1Q60855 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
Ripk1Q60855 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Ripk1Q60855 Gm27322-201ENSMUST00000184007 104 ntBASIC24.66■■□□□ 1.54
Ripk1Q60855 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC24.65■■□□□ 1.54
Ripk1Q60855 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
Ripk1Q60855 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC24.64■■□□□ 1.54
Ripk1Q60855 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC24.63■■□□□ 1.53
Ripk1Q60855 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC24.63■■□□□ 1.53
Ripk1Q60855 Gm2415-204ENSMUST00000190235 2004 ntBASIC24.62■■□□□ 1.53
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms