Protein–RNA interactions for Protein: Q5R1I1

Trav7d-3, T cell receptor alpha variable 7-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7d-3Q5R1I1 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trav7d-3Q5R1I1 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trav7d-3Q5R1I1 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trav7d-3Q5R1I1 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
Trav7d-3Q5R1I1 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC19.89■□□□□ 0.77
Trav7d-3Q5R1I1 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Trav7d-3Q5R1I1 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trav7d-3Q5R1I1 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trav7d-3Q5R1I1 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trav7d-3Q5R1I1 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trav7d-3Q5R1I1 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC19.81■□□□□ 0.76
Trav7d-3Q5R1I1 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trav7d-3Q5R1I1 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC19.74■□□□□ 0.75
Trav7d-3Q5R1I1 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trav7d-3Q5R1I1 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Trav7d-3Q5R1I1 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC19.7■□□□□ 0.74
Trav7d-3Q5R1I1 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trav7d-3Q5R1I1 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Trav7d-3Q5R1I1 Rab21-202ENSMUST00000218831 843 ntBASIC19.63■□□□□ 0.73
Trav7d-3Q5R1I1 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trav7d-3Q5R1I1 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC19.62■□□□□ 0.73
Trav7d-3Q5R1I1 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trav7d-3Q5R1I1 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Trav7d-3Q5R1I1 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Trav7d-3Q5R1I1 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trav7d-3Q5R1I1 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Trav7d-3Q5R1I1 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trav7d-3Q5R1I1 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trav7d-3Q5R1I1 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trav7d-3Q5R1I1 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC19.51■□□□□ 0.71
Trav7d-3Q5R1I1 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Trav7d-3Q5R1I1 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trav7d-3Q5R1I1 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trav7d-3Q5R1I1 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trav7d-3Q5R1I1 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Trav7d-3Q5R1I1 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trav7d-3Q5R1I1 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC19.47■□□□□ 0.71
Trav7d-3Q5R1I1 Zfp131-207ENSMUST00000224946 1783 ntBASIC19.46■□□□□ 0.71
Trav7d-3Q5R1I1 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trav7d-3Q5R1I1 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
Trav7d-3Q5R1I1 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trav7d-3Q5R1I1 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC19.42■□□□□ 0.7
Trav7d-3Q5R1I1 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC19.42■□□□□ 0.7
Trav7d-3Q5R1I1 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trav7d-3Q5R1I1 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trav7d-3Q5R1I1 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC19.39■□□□□ 0.7
Trav7d-3Q5R1I1 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Trav7d-3Q5R1I1 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Trav7d-3Q5R1I1 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Trav7d-3Q5R1I1 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trav7d-3Q5R1I1 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trav7d-3Q5R1I1 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC19.33■□□□□ 0.68
Trav7d-3Q5R1I1 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC19.32■□□□□ 0.68
Trav7d-3Q5R1I1 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Trav7d-3Q5R1I1 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Trav7d-3Q5R1I1 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trav7d-3Q5R1I1 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trav7d-3Q5R1I1 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Trav7d-3Q5R1I1 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trav7d-3Q5R1I1 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Trav7d-3Q5R1I1 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
Trav7d-3Q5R1I1 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Trav7d-3Q5R1I1 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC19.23■□□□□ 0.67
Trav7d-3Q5R1I1 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Trav7d-3Q5R1I1 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trav7d-3Q5R1I1 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trav7d-3Q5R1I1 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trav7d-3Q5R1I1 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Trav7d-3Q5R1I1 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trav7d-3Q5R1I1 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trav7d-3Q5R1I1 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trav7d-3Q5R1I1 Gm25262-201ENSMUST00000174934 133 ntBASIC19.12■□□□□ 0.65
Trav7d-3Q5R1I1 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trav7d-3Q5R1I1 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trav7d-3Q5R1I1 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trav7d-3Q5R1I1 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Trav7d-3Q5R1I1 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Trav7d-3Q5R1I1 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trav7d-3Q5R1I1 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Trav7d-3Q5R1I1 Gm2415-204ENSMUST00000190235 2004 ntBASIC19.08■□□□□ 0.65
Trav7d-3Q5R1I1 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Trav7d-3Q5R1I1 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trav7d-3Q5R1I1 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trav7d-3Q5R1I1 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Trav7d-3Q5R1I1 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trav7d-3Q5R1I1 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trav7d-3Q5R1I1 AL845457.1-201ENSMUST00000197244 68 ntBASIC19.02■□□□□ 0.64
Trav7d-3Q5R1I1 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC19.02■□□□□ 0.64
Trav7d-3Q5R1I1 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trav7d-3Q5R1I1 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC19■□□□□ 0.63
Trav7d-3Q5R1I1 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC19■□□□□ 0.63
Trav7d-3Q5R1I1 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC18.99■□□□□ 0.63
Trav7d-3Q5R1I1 Gm6658-202ENSMUST00000209493 1885 ntBASIC18.99■□□□□ 0.63
Trav7d-3Q5R1I1 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trav7d-3Q5R1I1 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Trav7d-3Q5R1I1 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trav7d-3Q5R1I1 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Trav7d-3Q5R1I1 Mipep-204ENSMUST00000225043 1548 ntBASIC18.94■□□□□ 0.62
Trav7d-3Q5R1I1 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trav7d-3Q5R1I1 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 10.6 ms