Protein–RNA interactions for Protein: Q5R1D2

Trav15-1-dv6-1, T cell receptor alpha variable 15-1-DV6-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-1-dv6-1Q5R1D2 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Trav15-1-dv6-1Q5R1D2 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Trav15-1-dv6-1Q5R1D2 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC21.15■□□□□ 0.98
Trav15-1-dv6-1Q5R1D2 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Trav15-1-dv6-1Q5R1D2 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Trav15-1-dv6-1Q5R1D2 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Trav15-1-dv6-1Q5R1D2 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Trav15-1-dv6-1Q5R1D2 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Trav15-1-dv6-1Q5R1D2 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Trav15-1-dv6-1Q5R1D2 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC21.03■□□□□ 0.96
Trav15-1-dv6-1Q5R1D2 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
Trav15-1-dv6-1Q5R1D2 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC20.99■□□□□ 0.95
Trav15-1-dv6-1Q5R1D2 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Trav15-1-dv6-1Q5R1D2 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Trav15-1-dv6-1Q5R1D2 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Trav15-1-dv6-1Q5R1D2 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Trav15-1-dv6-1Q5R1D2 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trav15-1-dv6-1Q5R1D2 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Trav15-1-dv6-1Q5R1D2 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trav15-1-dv6-1Q5R1D2 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC20.9■□□□□ 0.94
Trav15-1-dv6-1Q5R1D2 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
Trav15-1-dv6-1Q5R1D2 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC20.88■□□□□ 0.93
Trav15-1-dv6-1Q5R1D2 Gm27325-201ENSMUST00000175467 74 ntBASIC20.88■□□□□ 0.93
Trav15-1-dv6-1Q5R1D2 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Trav15-1-dv6-1Q5R1D2 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Trav15-1-dv6-1Q5R1D2 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trav15-1-dv6-1Q5R1D2 Gm2415-204ENSMUST00000190235 2004 ntBASIC20.73■□□□□ 0.91
Trav15-1-dv6-1Q5R1D2 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trav15-1-dv6-1Q5R1D2 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trav15-1-dv6-1Q5R1D2 AC153504.1-201ENSMUST00000218379 2290 ntBASIC20.67■□□□□ 0.9
Trav15-1-dv6-1Q5R1D2 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trav15-1-dv6-1Q5R1D2 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trav15-1-dv6-1Q5R1D2 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
Trav15-1-dv6-1Q5R1D2 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Trav15-1-dv6-1Q5R1D2 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Trav15-1-dv6-1Q5R1D2 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC20.61■□□□□ 0.89
Trav15-1-dv6-1Q5R1D2 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trav15-1-dv6-1Q5R1D2 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trav15-1-dv6-1Q5R1D2 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Trav15-1-dv6-1Q5R1D2 Gm6658-202ENSMUST00000209493 1885 ntBASIC20.58■□□□□ 0.88
Trav15-1-dv6-1Q5R1D2 Zfp131-207ENSMUST00000224946 1783 ntBASIC20.57■□□□□ 0.88
Trav15-1-dv6-1Q5R1D2 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trav15-1-dv6-1Q5R1D2 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trav15-1-dv6-1Q5R1D2 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trav15-1-dv6-1Q5R1D2 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Trav15-1-dv6-1Q5R1D2 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC20.52■□□□□ 0.88
Trav15-1-dv6-1Q5R1D2 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Trav15-1-dv6-1Q5R1D2 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trav15-1-dv6-1Q5R1D2 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trav15-1-dv6-1Q5R1D2 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trav15-1-dv6-1Q5R1D2 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Trav15-1-dv6-1Q5R1D2 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trav15-1-dv6-1Q5R1D2 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC20.43■□□□□ 0.86
Trav15-1-dv6-1Q5R1D2 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trav15-1-dv6-1Q5R1D2 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Trav15-1-dv6-1Q5R1D2 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC20.42■□□□□ 0.86
Trav15-1-dv6-1Q5R1D2 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Trav15-1-dv6-1Q5R1D2 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC20.4■□□□□ 0.86
Trav15-1-dv6-1Q5R1D2 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Trav15-1-dv6-1Q5R1D2 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
Trav15-1-dv6-1Q5R1D2 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Trav15-1-dv6-1Q5R1D2 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Trav15-1-dv6-1Q5R1D2 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Trav15-1-dv6-1Q5R1D2 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Trav15-1-dv6-1Q5R1D2 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trav15-1-dv6-1Q5R1D2 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trav15-1-dv6-1Q5R1D2 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trav15-1-dv6-1Q5R1D2 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC20.37■□□□□ 0.85
Trav15-1-dv6-1Q5R1D2 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trav15-1-dv6-1Q5R1D2 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trav15-1-dv6-1Q5R1D2 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC20.35■□□□□ 0.85
Trav15-1-dv6-1Q5R1D2 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trav15-1-dv6-1Q5R1D2 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC20.3■□□□□ 0.84
Trav15-1-dv6-1Q5R1D2 Gm25238-201ENSMUST00000174914 89 ntBASIC20.29■□□□□ 0.84
Trav15-1-dv6-1Q5R1D2 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trav15-1-dv6-1Q5R1D2 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Trav15-1-dv6-1Q5R1D2 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Trav15-1-dv6-1Q5R1D2 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC20.25■□□□□ 0.83
Trav15-1-dv6-1Q5R1D2 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trav15-1-dv6-1Q5R1D2 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trav15-1-dv6-1Q5R1D2 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trav15-1-dv6-1Q5R1D2 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trav15-1-dv6-1Q5R1D2 Zxda-201ENSMUST00000117281 2621 ntBASIC20.22■□□□□ 0.83
Trav15-1-dv6-1Q5R1D2 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trav15-1-dv6-1Q5R1D2 Gm9905-201ENSMUST00000065740 1845 ntBASIC20.2■□□□□ 0.82
Trav15-1-dv6-1Q5R1D2 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trav15-1-dv6-1Q5R1D2 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trav15-1-dv6-1Q5R1D2 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trav15-1-dv6-1Q5R1D2 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Trav15-1-dv6-1Q5R1D2 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Trav15-1-dv6-1Q5R1D2 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Trav15-1-dv6-1Q5R1D2 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
Trav15-1-dv6-1Q5R1D2 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Trav15-1-dv6-1Q5R1D2 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trav15-1-dv6-1Q5R1D2 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC20.1■□□□□ 0.81
Trav15-1-dv6-1Q5R1D2 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trav15-1-dv6-1Q5R1D2 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trav15-1-dv6-1Q5R1D2 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trav15-1-dv6-1Q5R1D2 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trav15-1-dv6-1Q5R1D2 Gm6206-201ENSMUST00000133472 2199 ntBASIC20.05■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 13.6 ms