Protein–RNA interactions for Protein: Q3V2L0

Defb28, Beta-defensin, mousemouse

Predictions only

Length 89 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Defb28Q3V2L0 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
Defb28Q3V2L0 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC27.77■■■□□ 2.04
Defb28Q3V2L0 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC27.76■■■□□ 2.03
Defb28Q3V2L0 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
Defb28Q3V2L0 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
Defb28Q3V2L0 Zfp131-205ENSMUST00000223812 663 ntBASIC27.72■■■□□ 2.03
Defb28Q3V2L0 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC27.62■■■□□ 2.01
Defb28Q3V2L0 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
Defb28Q3V2L0 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
Defb28Q3V2L0 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC27.59■■■□□ 2.01
Defb28Q3V2L0 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC27.58■■■□□ 2.01
Defb28Q3V2L0 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC27.58■■■□□ 2.01
Defb28Q3V2L0 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC27.56■■■□□ 2
Defb28Q3V2L0 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC27.54■■■□□ 2
Defb28Q3V2L0 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC27.54■■■□□ 2
Defb28Q3V2L0 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
Defb28Q3V2L0 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
Defb28Q3V2L0 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC27.49■■□□□ 1.99
Defb28Q3V2L0 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
Defb28Q3V2L0 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
Defb28Q3V2L0 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
Defb28Q3V2L0 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC27.42■■□□□ 1.98
Defb28Q3V2L0 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC27.42■■□□□ 1.98
Defb28Q3V2L0 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC27.41■■□□□ 1.98
Defb28Q3V2L0 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
Defb28Q3V2L0 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
Defb28Q3V2L0 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
Defb28Q3V2L0 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC27.36■■□□□ 1.97
Defb28Q3V2L0 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
Defb28Q3V2L0 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
Defb28Q3V2L0 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
Defb28Q3V2L0 AC166822.3-201ENSMUST00000227394 661 ntBASIC27.22■■□□□ 1.95
Defb28Q3V2L0 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
Defb28Q3V2L0 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
Defb28Q3V2L0 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC27.19■■□□□ 1.94
Defb28Q3V2L0 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
Defb28Q3V2L0 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC27.18■■□□□ 1.94
Defb28Q3V2L0 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
Defb28Q3V2L0 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
Defb28Q3V2L0 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
Defb28Q3V2L0 CT025624.2-201ENSMUST00000223609 1909 ntBASIC27.12■■□□□ 1.93
Defb28Q3V2L0 Gm42596-201ENSMUST00000196305 1958 ntBASIC27.11■■□□□ 1.93
Defb28Q3V2L0 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
Defb28Q3V2L0 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
Defb28Q3V2L0 Gm10524-201ENSMUST00000181931 1893 ntBASIC27.04■■□□□ 1.92
Defb28Q3V2L0 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
Defb28Q3V2L0 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC27.03■■□□□ 1.92
Defb28Q3V2L0 AL845457.1-201ENSMUST00000197244 68 ntBASIC26.98■■□□□ 1.91
Defb28Q3V2L0 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC26.97■■□□□ 1.91
Defb28Q3V2L0 Gm16148-201ENSMUST00000119653 893 ntBASIC26.96■■□□□ 1.91
Defb28Q3V2L0 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC26.9■■□□□ 1.9
Defb28Q3V2L0 Tdp2-203ENSMUST00000223804 1136 ntBASIC26.89■■□□□ 1.9
Defb28Q3V2L0 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
Defb28Q3V2L0 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
Defb28Q3V2L0 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
Defb28Q3V2L0 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC26.86■■□□□ 1.89
Defb28Q3V2L0 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
Defb28Q3V2L0 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
Defb28Q3V2L0 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC26.84■■□□□ 1.89
Defb28Q3V2L0 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
Defb28Q3V2L0 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC26.83■■□□□ 1.89
Defb28Q3V2L0 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
Defb28Q3V2L0 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC26.82■■□□□ 1.88
Defb28Q3V2L0 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC26.8■■□□□ 1.88
Defb28Q3V2L0 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC26.79■■□□□ 1.88
Defb28Q3V2L0 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
Defb28Q3V2L0 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC26.73■■□□□ 1.87
Defb28Q3V2L0 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
Defb28Q3V2L0 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
Defb28Q3V2L0 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC26.72■■□□□ 1.87
Defb28Q3V2L0 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
Defb28Q3V2L0 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
Defb28Q3V2L0 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC26.69■■□□□ 1.86
Defb28Q3V2L0 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
Defb28Q3V2L0 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC26.66■■□□□ 1.86
Defb28Q3V2L0 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC26.66■■□□□ 1.86
Defb28Q3V2L0 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC26.66■■□□□ 1.86
Defb28Q3V2L0 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC26.65■■□□□ 1.86
Defb28Q3V2L0 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC26.63■■□□□ 1.85
Defb28Q3V2L0 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC26.61■■□□□ 1.85
Defb28Q3V2L0 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC26.6■■□□□ 1.85
Defb28Q3V2L0 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC26.59■■□□□ 1.85
Defb28Q3V2L0 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Defb28Q3V2L0 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC26.57■■□□□ 1.84
Defb28Q3V2L0 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC26.57■■□□□ 1.84
Defb28Q3V2L0 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
Defb28Q3V2L0 Peli2-204ENSMUST00000226513 1320 ntBASIC26.56■■□□□ 1.84
Defb28Q3V2L0 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC26.54■■□□□ 1.84
Defb28Q3V2L0 Gm45855-201ENSMUST00000212546 880 ntBASIC26.54■■□□□ 1.84
Defb28Q3V2L0 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Defb28Q3V2L0 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
Defb28Q3V2L0 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
Defb28Q3V2L0 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC26.48■■□□□ 1.83
Defb28Q3V2L0 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Defb28Q3V2L0 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
Defb28Q3V2L0 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC26.42■■□□□ 1.82
Defb28Q3V2L0 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Defb28Q3V2L0 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Defb28Q3V2L0 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC26.4■■□□□ 1.82
Defb28Q3V2L0 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC26.36■■□□□ 1.81
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms