Protein–RNA interactions for Protein: Q3UTQ8

Cdkl5, Cyclin-dependent kinase-like 5, mousemouse

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkl5Q3UTQ8 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC32.18■■■□□ 2.74
Cdkl5Q3UTQ8 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC32.18■■■□□ 2.74
Cdkl5Q3UTQ8 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC32.15■■■□□ 2.74
Cdkl5Q3UTQ8 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC32.13■■■□□ 2.73
Cdkl5Q3UTQ8 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC32.11■■■□□ 2.73
Cdkl5Q3UTQ8 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC32.1■■■□□ 2.73
Cdkl5Q3UTQ8 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC32.08■■■□□ 2.73
Cdkl5Q3UTQ8 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC32■■■□□ 2.71
Cdkl5Q3UTQ8 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
Cdkl5Q3UTQ8 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC31.97■■■□□ 2.71
Cdkl5Q3UTQ8 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
Cdkl5Q3UTQ8 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC31.9■■■□□ 2.7
Cdkl5Q3UTQ8 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC31.89■■■□□ 2.7
Cdkl5Q3UTQ8 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC31.84■■■□□ 2.69
Cdkl5Q3UTQ8 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC31.83■■■□□ 2.69
Cdkl5Q3UTQ8 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
Cdkl5Q3UTQ8 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC31.8■■■□□ 2.68
Cdkl5Q3UTQ8 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC31.8■■■□□ 2.68
Cdkl5Q3UTQ8 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
Cdkl5Q3UTQ8 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC31.77■■■□□ 2.68
Cdkl5Q3UTQ8 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
Cdkl5Q3UTQ8 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC31.73■■■□□ 2.67
Cdkl5Q3UTQ8 Gm25262-201ENSMUST00000174934 133 ntBASIC31.7■■■□□ 2.67
Cdkl5Q3UTQ8 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC31.7■■■□□ 2.66
Cdkl5Q3UTQ8 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC31.69■■■□□ 2.66
Cdkl5Q3UTQ8 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
Cdkl5Q3UTQ8 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC31.67■■■□□ 2.66
Cdkl5Q3UTQ8 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC31.67■■■□□ 2.66
Cdkl5Q3UTQ8 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC31.66■■■□□ 2.66
Cdkl5Q3UTQ8 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC31.62■■■□□ 2.65
Cdkl5Q3UTQ8 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
Cdkl5Q3UTQ8 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
Cdkl5Q3UTQ8 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
Cdkl5Q3UTQ8 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
Cdkl5Q3UTQ8 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC31.58■■■□□ 2.65
Cdkl5Q3UTQ8 Zfp131-207ENSMUST00000224946 1783 ntBASIC31.55■■■□□ 2.64
Cdkl5Q3UTQ8 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC31.54■■■□□ 2.64
Cdkl5Q3UTQ8 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
Cdkl5Q3UTQ8 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
Cdkl5Q3UTQ8 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
Cdkl5Q3UTQ8 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
Cdkl5Q3UTQ8 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC31.33■■■□□ 2.61
Cdkl5Q3UTQ8 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC31.26■■■□□ 2.59
Cdkl5Q3UTQ8 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
Cdkl5Q3UTQ8 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
Cdkl5Q3UTQ8 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
Cdkl5Q3UTQ8 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC31.22■■■□□ 2.59
Cdkl5Q3UTQ8 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC31.2■■■□□ 2.59
Cdkl5Q3UTQ8 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
Cdkl5Q3UTQ8 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
Cdkl5Q3UTQ8 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
Cdkl5Q3UTQ8 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC31.14■■■□□ 2.58
Cdkl5Q3UTQ8 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC31.14■■■□□ 2.58
Cdkl5Q3UTQ8 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC31.14■■■□□ 2.57
Cdkl5Q3UTQ8 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
Cdkl5Q3UTQ8 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC31.12■■■□□ 2.57
Cdkl5Q3UTQ8 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
Cdkl5Q3UTQ8 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC31.06■■■□□ 2.56
Cdkl5Q3UTQ8 AL845457.1-201ENSMUST00000197244 68 ntBASIC31.04■■■□□ 2.56
Cdkl5Q3UTQ8 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC31.03■■■□□ 2.56
Cdkl5Q3UTQ8 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC31.03■■■□□ 2.56
Cdkl5Q3UTQ8 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC31.02■■■□□ 2.56
Cdkl5Q3UTQ8 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC30.96■■■□□ 2.55
Cdkl5Q3UTQ8 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
Cdkl5Q3UTQ8 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC30.95■■■□□ 2.55
Cdkl5Q3UTQ8 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC30.93■■■□□ 2.54
Cdkl5Q3UTQ8 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC30.9■■■□□ 2.54
Cdkl5Q3UTQ8 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC30.89■■■□□ 2.54
Cdkl5Q3UTQ8 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
Cdkl5Q3UTQ8 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
Cdkl5Q3UTQ8 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
Cdkl5Q3UTQ8 Gm17082-201ENSMUST00000166043 1091 ntBASIC30.86■■■□□ 2.53
Cdkl5Q3UTQ8 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC30.85■■■□□ 2.53
Cdkl5Q3UTQ8 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC30.85■■■□□ 2.53
Cdkl5Q3UTQ8 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
Cdkl5Q3UTQ8 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC30.81■■■□□ 2.52
Cdkl5Q3UTQ8 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC30.81■■■□□ 2.52
Cdkl5Q3UTQ8 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC30.8■■■□□ 2.52
Cdkl5Q3UTQ8 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC30.79■■■□□ 2.52
Cdkl5Q3UTQ8 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC30.77■■■□□ 2.52
Cdkl5Q3UTQ8 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
Cdkl5Q3UTQ8 Gm27322-201ENSMUST00000184007 104 ntBASIC30.76■■■□□ 2.51
Cdkl5Q3UTQ8 Mipep-204ENSMUST00000225043 1548 ntBASIC30.75■■■□□ 2.51
Cdkl5Q3UTQ8 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC30.73■■■□□ 2.51
Cdkl5Q3UTQ8 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
Cdkl5Q3UTQ8 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC30.7■■■□□ 2.51
Cdkl5Q3UTQ8 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC30.7■■■□□ 2.5
Cdkl5Q3UTQ8 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.5
Cdkl5Q3UTQ8 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
Cdkl5Q3UTQ8 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
Cdkl5Q3UTQ8 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
Cdkl5Q3UTQ8 Gm26115-201ENSMUST00000175605 87 ntBASIC30.63■■■□□ 2.49
Cdkl5Q3UTQ8 Gm2415-204ENSMUST00000190235 2004 ntBASIC30.63■■■□□ 2.49
Cdkl5Q3UTQ8 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC30.62■■■□□ 2.49
Cdkl5Q3UTQ8 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC30.62■■■□□ 2.49
Cdkl5Q3UTQ8 AC166822.3-201ENSMUST00000227394 661 ntBASIC30.6■■■□□ 2.49
Cdkl5Q3UTQ8 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC30.58■■■□□ 2.49
Cdkl5Q3UTQ8 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC30.52■■■□□ 2.48
Cdkl5Q3UTQ8 Gm8109-201ENSMUST00000194076 746 ntBASIC30.52■■■□□ 2.48
Cdkl5Q3UTQ8 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms