Protein–RNA interactions for Protein: Q3UPI1

Fam198b, Protein FAM198B, mousemouse

Predictions only

Length 517 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam198bQ3UPI1 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC36.16■■■■□ 3.38
Fam198bQ3UPI1 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC36.1■■■■□ 3.37
Fam198bQ3UPI1 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC36.03■■■■□ 3.36
Fam198bQ3UPI1 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC35.98■■■■□ 3.35
Fam198bQ3UPI1 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC35.97■■■■□ 3.35
Fam198bQ3UPI1 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC35.95■■■■□ 3.35
Fam198bQ3UPI1 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC35.95■■■■□ 3.35
Fam198bQ3UPI1 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC35.94■■■■□ 3.34
Fam198bQ3UPI1 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC35.9■■■■□ 3.34
Fam198bQ3UPI1 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC35.88■■■■□ 3.33
Fam198bQ3UPI1 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC35.84■■■■□ 3.33
Fam198bQ3UPI1 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC35.84■■■■□ 3.33
Fam198bQ3UPI1 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC35.82■■■■□ 3.32
Fam198bQ3UPI1 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC35.82■■■■□ 3.32
Fam198bQ3UPI1 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC35.79■■■■□ 3.32
Fam198bQ3UPI1 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC35.7■■■■□ 3.31
Fam198bQ3UPI1 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC35.7■■■■□ 3.31
Fam198bQ3UPI1 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC35.68■■■■□ 3.3
Fam198bQ3UPI1 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC35.67■■■■□ 3.3
Fam198bQ3UPI1 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC35.67■■■■□ 3.3
Fam198bQ3UPI1 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC35.66■■■■□ 3.3
Fam198bQ3UPI1 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC35.64■■■■□ 3.3
Fam198bQ3UPI1 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC35.61■■■■□ 3.29
Fam198bQ3UPI1 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC35.61■■■■□ 3.29
Fam198bQ3UPI1 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC35.6■■■■□ 3.29
Fam198bQ3UPI1 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC35.56■■■■□ 3.28
Fam198bQ3UPI1 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC35.49■■■■□ 3.27
Fam198bQ3UPI1 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC35.49■■■■□ 3.27
Fam198bQ3UPI1 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC35.48■■■■□ 3.27
Fam198bQ3UPI1 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC35.44■■■■□ 3.26
Fam198bQ3UPI1 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC35.4■■■■□ 3.26
Fam198bQ3UPI1 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC35.39■■■■□ 3.26
Fam198bQ3UPI1 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC35.39■■■■□ 3.26
Fam198bQ3UPI1 AC166822.3-201ENSMUST00000227394 661 ntBASIC35.34■■■■□ 3.25
Fam198bQ3UPI1 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC35.31■■■■□ 3.24
Fam198bQ3UPI1 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC35.28■■■■□ 3.24
Fam198bQ3UPI1 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC35.27■■■■□ 3.24
Fam198bQ3UPI1 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC35.25■■■■□ 3.23
Fam198bQ3UPI1 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC35.15■■■■□ 3.22
Fam198bQ3UPI1 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC35.15■■■■□ 3.22
Fam198bQ3UPI1 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC35.14■■■■□ 3.22
Fam198bQ3UPI1 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC35.13■■■■□ 3.21
Fam198bQ3UPI1 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC35.09■■■■□ 3.21
Fam198bQ3UPI1 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC35.07■■■■□ 3.2
Fam198bQ3UPI1 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC35.05■■■■□ 3.2
Fam198bQ3UPI1 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC35.04■■■■□ 3.2
Fam198bQ3UPI1 Gm42596-201ENSMUST00000196305 1958 ntBASIC35.04■■■■□ 3.2
Fam198bQ3UPI1 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC35.02■■■■□ 3.2
Fam198bQ3UPI1 Gm16148-201ENSMUST00000119653 893 ntBASIC34.98■■■■□ 3.19
Fam198bQ3UPI1 AL845457.1-201ENSMUST00000197244 68 ntBASIC34.97■■■■□ 3.19
Fam198bQ3UPI1 Tdp2-203ENSMUST00000223804 1136 ntBASIC34.97■■■■□ 3.19
Fam198bQ3UPI1 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC34.97■■■■□ 3.19
Fam198bQ3UPI1 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC34.94■■■■□ 3.18
Fam198bQ3UPI1 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC34.94■■■■□ 3.18
Fam198bQ3UPI1 CT025624.2-201ENSMUST00000223609 1909 ntBASIC34.92■■■■□ 3.18
Fam198bQ3UPI1 Gm10524-201ENSMUST00000181931 1893 ntBASIC34.9■■■■□ 3.18
Fam198bQ3UPI1 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC34.9■■■■□ 3.18
Fam198bQ3UPI1 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC34.88■■■■□ 3.17
Fam198bQ3UPI1 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC34.86■■■■□ 3.17
Fam198bQ3UPI1 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC34.84■■■■□ 3.17
Fam198bQ3UPI1 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC34.82■■■■□ 3.16
Fam198bQ3UPI1 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC34.8■■■■□ 3.16
Fam198bQ3UPI1 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC34.79■■■■□ 3.16
Fam198bQ3UPI1 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC34.79■■■■□ 3.16
Fam198bQ3UPI1 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC34.78■■■■□ 3.16
Fam198bQ3UPI1 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC34.76■■■■□ 3.16
Fam198bQ3UPI1 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC34.76■■■■□ 3.16
Fam198bQ3UPI1 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC34.74■■■■□ 3.15
Fam198bQ3UPI1 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC34.71■■■■□ 3.15
Fam198bQ3UPI1 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC34.71■■■■□ 3.15
Fam198bQ3UPI1 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC34.71■■■■□ 3.15
Fam198bQ3UPI1 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC34.69■■■■□ 3.14
Fam198bQ3UPI1 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC34.69■■■■□ 3.14
Fam198bQ3UPI1 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC34.65■■■■□ 3.14
Fam198bQ3UPI1 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC34.64■■■■□ 3.14
Fam198bQ3UPI1 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC34.63■■■■□ 3.13
Fam198bQ3UPI1 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC34.63■■■■□ 3.13
Fam198bQ3UPI1 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC34.62■■■■□ 3.13
Fam198bQ3UPI1 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC34.6■■■■□ 3.13
Fam198bQ3UPI1 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC34.57■■■■□ 3.12
Fam198bQ3UPI1 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC34.55■■■■□ 3.12
Fam198bQ3UPI1 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC34.54■■■■□ 3.12
Fam198bQ3UPI1 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC34.54■■■■□ 3.12
Fam198bQ3UPI1 Gm45855-201ENSMUST00000212546 880 ntBASIC34.53■■■■□ 3.12
Fam198bQ3UPI1 Peli2-204ENSMUST00000226513 1320 ntBASIC34.51■■■■□ 3.11
Fam198bQ3UPI1 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC34.5■■■■□ 3.11
Fam198bQ3UPI1 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC34.48■■■■□ 3.11
Fam198bQ3UPI1 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC34.47■■■■□ 3.11
Fam198bQ3UPI1 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC34.47■■■■□ 3.11
Fam198bQ3UPI1 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC34.41■■■■□ 3.1
Fam198bQ3UPI1 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC34.38■■■■□ 3.09
Fam198bQ3UPI1 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC34.38■■■■□ 3.09
Fam198bQ3UPI1 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC34.37■■■■□ 3.09
Fam198bQ3UPI1 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC34.37■■■■□ 3.09
Fam198bQ3UPI1 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC34.37■■■■□ 3.09
Fam198bQ3UPI1 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC34.34■■■■□ 3.09
Fam198bQ3UPI1 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC34.32■■■■□ 3.08
Fam198bQ3UPI1 Gm5987-201ENSMUST00000196433 1151 ntBASIC34.32■■■■□ 3.08
Fam198bQ3UPI1 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC34.31■■■■□ 3.08
Fam198bQ3UPI1 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC34.3■■■■□ 3.08
Retrieved 100 of 76,532 protein–RNA pairs in 13.9 ms