Protein–RNA interactions for Protein: Q3UMB9

Washc4, WASH complex subunit 4, mousemouse

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Washc4Q3UMB9 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC33.78■■■■□ 3
Washc4Q3UMB9 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC33.77■■■■□ 3
Washc4Q3UMB9 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC33.74■■■□□ 2.99
Washc4Q3UMB9 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC33.63■■■□□ 2.97
Washc4Q3UMB9 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC33.57■■■□□ 2.96
Washc4Q3UMB9 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC33.56■■■□□ 2.96
Washc4Q3UMB9 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC33.55■■■□□ 2.96
Washc4Q3UMB9 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC33.48■■■□□ 2.95
Washc4Q3UMB9 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC33.47■■■□□ 2.95
Washc4Q3UMB9 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC33.47■■■□□ 2.95
Washc4Q3UMB9 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC33.46■■■□□ 2.95
Washc4Q3UMB9 Gm17082-201ENSMUST00000166043 1091 ntBASIC33.44■■■□□ 2.94
Washc4Q3UMB9 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC33.44■■■□□ 2.94
Washc4Q3UMB9 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC33.43■■■□□ 2.94
Washc4Q3UMB9 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC33.42■■■□□ 2.94
Washc4Q3UMB9 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC33.39■■■□□ 2.94
Washc4Q3UMB9 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC33.31■■■□□ 2.92
Washc4Q3UMB9 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC33.3■■■□□ 2.92
Washc4Q3UMB9 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC33.3■■■□□ 2.92
Washc4Q3UMB9 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC33.27■■■□□ 2.92
Washc4Q3UMB9 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC33.24■■■□□ 2.91
Washc4Q3UMB9 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC33.21■■■□□ 2.91
Washc4Q3UMB9 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC33.19■■■□□ 2.9
Washc4Q3UMB9 Gm27322-201ENSMUST00000184007 104 ntBASIC33.19■■■□□ 2.9
Washc4Q3UMB9 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC33.18■■■□□ 2.9
Washc4Q3UMB9 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC33.15■■■□□ 2.9
Washc4Q3UMB9 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC33.14■■■□□ 2.9
Washc4Q3UMB9 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC33.07■■■□□ 2.88
Washc4Q3UMB9 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC33.07■■■□□ 2.88
Washc4Q3UMB9 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC33.03■■■□□ 2.88
Washc4Q3UMB9 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC33■■■□□ 2.87
Washc4Q3UMB9 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC32.99■■■□□ 2.87
Washc4Q3UMB9 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC32.98■■■□□ 2.87
Washc4Q3UMB9 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC32.96■■■□□ 2.87
Washc4Q3UMB9 Gm24804-201ENSMUST00000174982 85 ntBASIC32.94■■■□□ 2.86
Washc4Q3UMB9 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC32.87■■■□□ 2.85
Washc4Q3UMB9 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC32.86■■■□□ 2.85
Washc4Q3UMB9 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC32.8■■■□□ 2.84
Washc4Q3UMB9 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC32.79■■■□□ 2.84
Washc4Q3UMB9 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC32.79■■■□□ 2.84
Washc4Q3UMB9 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC32.79■■■□□ 2.84
Washc4Q3UMB9 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC32.76■■■□□ 2.83
Washc4Q3UMB9 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC32.75■■■□□ 2.83
Washc4Q3UMB9 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC32.74■■■□□ 2.83
Washc4Q3UMB9 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC32.71■■■□□ 2.83
Washc4Q3UMB9 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC32.67■■■□□ 2.82
Washc4Q3UMB9 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC32.67■■■□□ 2.82
Washc4Q3UMB9 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC32.62■■■□□ 2.81
Washc4Q3UMB9 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC32.6■■■□□ 2.81
Washc4Q3UMB9 Zfp131-207ENSMUST00000224946 1783 ntBASIC32.56■■■□□ 2.8
Washc4Q3UMB9 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC32.56■■■□□ 2.8
Washc4Q3UMB9 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC32.53■■■□□ 2.8
Washc4Q3UMB9 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC32.53■■■□□ 2.8
Washc4Q3UMB9 AL845457.1-201ENSMUST00000197244 68 ntBASIC32.52■■■□□ 2.8
Washc4Q3UMB9 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.8
Washc4Q3UMB9 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.79
Washc4Q3UMB9 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC32.51■■■□□ 2.79
Washc4Q3UMB9 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC32.49■■■□□ 2.79
Washc4Q3UMB9 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC32.45■■■□□ 2.78
Washc4Q3UMB9 AC166822.3-201ENSMUST00000227394 661 ntBASIC32.43■■■□□ 2.78
Washc4Q3UMB9 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC32.43■■■□□ 2.78
Washc4Q3UMB9 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC32.41■■■□□ 2.78
Washc4Q3UMB9 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC32.38■■■□□ 2.77
Washc4Q3UMB9 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC32.37■■■□□ 2.77
Washc4Q3UMB9 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC32.36■■■□□ 2.77
Washc4Q3UMB9 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC32.35■■■□□ 2.77
Washc4Q3UMB9 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC32.33■■■□□ 2.77
Washc4Q3UMB9 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC32.31■■■□□ 2.76
Washc4Q3UMB9 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC32.3■■■□□ 2.76
Washc4Q3UMB9 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC32.29■■■□□ 2.76
Washc4Q3UMB9 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC32.29■■■□□ 2.76
Washc4Q3UMB9 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC32.26■■■□□ 2.75
Washc4Q3UMB9 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC32.15■■■□□ 2.74
Washc4Q3UMB9 Zfp131-205ENSMUST00000223812 663 ntBASIC32.15■■■□□ 2.74
Washc4Q3UMB9 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC32.13■■■□□ 2.73
Washc4Q3UMB9 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC32.1■■■□□ 2.73
Washc4Q3UMB9 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC32.09■■■□□ 2.73
Washc4Q3UMB9 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC32.08■■■□□ 2.73
Washc4Q3UMB9 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC32.06■■■□□ 2.72
Washc4Q3UMB9 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC32.06■■■□□ 2.72
Washc4Q3UMB9 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC32.04■■■□□ 2.72
Washc4Q3UMB9 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC32.04■■■□□ 2.72
Washc4Q3UMB9 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC32.04■■■□□ 2.72
Washc4Q3UMB9 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC32.03■■■□□ 2.72
Washc4Q3UMB9 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC32.01■■■□□ 2.71
Washc4Q3UMB9 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC31.99■■■□□ 2.71
Washc4Q3UMB9 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC31.99■■■□□ 2.71
Washc4Q3UMB9 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC31.96■■■□□ 2.71
Washc4Q3UMB9 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
Washc4Q3UMB9 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
Washc4Q3UMB9 Mipep-204ENSMUST00000225043 1548 ntBASIC31.94■■■□□ 2.7
Washc4Q3UMB9 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC31.92■■■□□ 2.7
Washc4Q3UMB9 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC31.89■■■□□ 2.7
Washc4Q3UMB9 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC31.87■■■□□ 2.69
Washc4Q3UMB9 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC31.86■■■□□ 2.69
Washc4Q3UMB9 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC31.84■■■□□ 2.69
Washc4Q3UMB9 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
Washc4Q3UMB9 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
Washc4Q3UMB9 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC31.84■■■□□ 2.69
Washc4Q3UMB9 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC31.81■■■□□ 2.68
Retrieved 100 of 76,532 protein–RNA pairs in 137 ms