Protein–RNA interactions for Protein: Q3UHC2

Lrrk1, Leucine-rich repeat serine/threonine-protein kinase 1, mousemouse

Predictions only

Length 2,014 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrk1Q3UHC2 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC26,23■■□□□ 1,79
Lrrk1Q3UHC2 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC26,23■■□□□ 1,79
Lrrk1Q3UHC2 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC26,21■■□□□ 1,79
Lrrk1Q3UHC2 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC26,19■■□□□ 1,78
Lrrk1Q3UHC2 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC26,19■■□□□ 1,78
Lrrk1Q3UHC2 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC26,17■■□□□ 1,78
Lrrk1Q3UHC2 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC26,16■■□□□ 1,78
Lrrk1Q3UHC2 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC26,16■■□□□ 1,78
Lrrk1Q3UHC2 Gm8109-201ENSMUST00000194076 746 ntBASIC26,15■■□□□ 1,78
Lrrk1Q3UHC2 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC26,15■■□□□ 1,78
Lrrk1Q3UHC2 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC26,14■■□□□ 1,77
Lrrk1Q3UHC2 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC26,09■■□□□ 1,77
Lrrk1Q3UHC2 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC26,08■■□□□ 1,77
Lrrk1Q3UHC2 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC26,08■■□□□ 1,77
Lrrk1Q3UHC2 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC26,06■■□□□ 1,76
Lrrk1Q3UHC2 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC26,05■■□□□ 1,76
Lrrk1Q3UHC2 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC26,04■■□□□ 1,76
Lrrk1Q3UHC2 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC26,03■■□□□ 1,76
Lrrk1Q3UHC2 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC26,01■■□□□ 1,75
Lrrk1Q3UHC2 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC25,96■■□□□ 1,75
Lrrk1Q3UHC2 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC25,96■■□□□ 1,75
Lrrk1Q3UHC2 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC25,94■■□□□ 1,74
Lrrk1Q3UHC2 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC25,93■■□□□ 1,74
Lrrk1Q3UHC2 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC25,92■■□□□ 1,74
Lrrk1Q3UHC2 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC25,92■■□□□ 1,74
Lrrk1Q3UHC2 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC25,84■■□□□ 1,73
Lrrk1Q3UHC2 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC25,83■■□□□ 1,73
Lrrk1Q3UHC2 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC25,82■■□□□ 1,72
Lrrk1Q3UHC2 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC25,8■■□□□ 1,72
Lrrk1Q3UHC2 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC25,79■■□□□ 1,72
Lrrk1Q3UHC2 Zfp131-207ENSMUST00000224946 1783 ntBASIC25,77■■□□□ 1,72
Lrrk1Q3UHC2 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC25,76■■□□□ 1,71
Lrrk1Q3UHC2 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC25,72■■□□□ 1,71
Lrrk1Q3UHC2 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC25,7■■□□□ 1,7
Lrrk1Q3UHC2 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC25,69■■□□□ 1,7
Lrrk1Q3UHC2 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC25,67■■□□□ 1,7
Lrrk1Q3UHC2 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC25,64■■□□□ 1,69
Lrrk1Q3UHC2 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC25,62■■□□□ 1,69
Lrrk1Q3UHC2 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC25,6■■□□□ 1,69
Lrrk1Q3UHC2 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC25,58■■□□□ 1,68
Lrrk1Q3UHC2 Gm17082-201ENSMUST00000166043 1091 ntBASIC25,56■■□□□ 1,68
Lrrk1Q3UHC2 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC25,54■■□□□ 1,68
Lrrk1Q3UHC2 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC25,5■■□□□ 1,67
Lrrk1Q3UHC2 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC25,5■■□□□ 1,67
Lrrk1Q3UHC2 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC25,44■■□□□ 1,66
Lrrk1Q3UHC2 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC25,42■■□□□ 1,66
Lrrk1Q3UHC2 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC25,42■■□□□ 1,66
Lrrk1Q3UHC2 AL845457.1-201ENSMUST00000197244 68 ntBASIC25,4■■□□□ 1,66
Lrrk1Q3UHC2 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC25,4■■□□□ 1,66
Lrrk1Q3UHC2 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC25,39■■□□□ 1,66
Lrrk1Q3UHC2 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC25,39■■□□□ 1,66
Lrrk1Q3UHC2 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC25,38■■□□□ 1,65
Lrrk1Q3UHC2 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC25,37■■□□□ 1,65
Lrrk1Q3UHC2 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC25,33■■□□□ 1,65
Lrrk1Q3UHC2 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC25,32■■□□□ 1,64
Lrrk1Q3UHC2 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC25,32■■□□□ 1,64
Lrrk1Q3UHC2 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC25,31■■□□□ 1,64
Lrrk1Q3UHC2 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC25,31■■□□□ 1,64
Lrrk1Q3UHC2 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC25,31■■□□□ 1,64
Lrrk1Q3UHC2 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC25,3■■□□□ 1,64
Lrrk1Q3UHC2 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC25,3■■□□□ 1,64
Lrrk1Q3UHC2 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC25,29■■□□□ 1,64
Lrrk1Q3UHC2 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC25,27■■□□□ 1,64
Lrrk1Q3UHC2 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC25,26■■□□□ 1,63
Lrrk1Q3UHC2 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC25,25■■□□□ 1,63
Lrrk1Q3UHC2 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC25,23■■□□□ 1,63
Lrrk1Q3UHC2 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC25,18■■□□□ 1,62
Lrrk1Q3UHC2 Gm27322-201ENSMUST00000184007 104 ntBASIC25,18■■□□□ 1,62
Lrrk1Q3UHC2 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC25,18■■□□□ 1,62
Lrrk1Q3UHC2 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC25,13■■□□□ 1,61
Lrrk1Q3UHC2 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC25,12■■□□□ 1,61
Lrrk1Q3UHC2 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC25,1■■□□□ 1,61
Lrrk1Q3UHC2 Gm24804-201ENSMUST00000174982 85 ntBASIC25,08■■□□□ 1,61
Lrrk1Q3UHC2 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC25,04■■□□□ 1,6
Lrrk1Q3UHC2 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC25,04■■□□□ 1,6
Lrrk1Q3UHC2 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC25,03■■□□□ 1,6
Lrrk1Q3UHC2 AC166822.3-201ENSMUST00000227394 661 ntBASIC25,03■■□□□ 1,6
Lrrk1Q3UHC2 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC25,03■■□□□ 1,6
Lrrk1Q3UHC2 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC25,03■■□□□ 1,6
Lrrk1Q3UHC2 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC25,02■■□□□ 1,6
Lrrk1Q3UHC2 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC24,98■■□□□ 1,59
Lrrk1Q3UHC2 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC24,98■■□□□ 1,59
Lrrk1Q3UHC2 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC24,97■■□□□ 1,59
Lrrk1Q3UHC2 Mipep-204ENSMUST00000225043 1548 ntBASIC24,97■■□□□ 1,59
Lrrk1Q3UHC2 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC24,95■■□□□ 1,59
Lrrk1Q3UHC2 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC24,95■■□□□ 1,58
Lrrk1Q3UHC2 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC24,94■■□□□ 1,58
Lrrk1Q3UHC2 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC24,94■■□□□ 1,58
Lrrk1Q3UHC2 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC24,94■■□□□ 1,58
Lrrk1Q3UHC2 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC24,93■■□□□ 1,58
Lrrk1Q3UHC2 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC24,92■■□□□ 1,58
Lrrk1Q3UHC2 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC24,87■■□□□ 1,57
Lrrk1Q3UHC2 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC24,85■■□□□ 1,57
Lrrk1Q3UHC2 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC24,83■■□□□ 1,57
Lrrk1Q3UHC2 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC24,81■■□□□ 1,56
Lrrk1Q3UHC2 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC24,81■■□□□ 1,56
Lrrk1Q3UHC2 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC24,81■■□□□ 1,56
Lrrk1Q3UHC2 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC24,8■■□□□ 1,56
Lrrk1Q3UHC2 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC24,79■■□□□ 1,56
Lrrk1Q3UHC2 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC24,77■■□□□ 1,56
Retrieved 100 of 76,532 protein–RNA pairs in 11,4 ms