Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC24.68■■□□□ 1.54
SgcbP82349 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
SgcbP82349 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC24.65■■□□□ 1.54
SgcbP82349 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
SgcbP82349 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
SgcbP82349 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC24.61■■□□□ 1.53
SgcbP82349 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC24.6■■□□□ 1.53
SgcbP82349 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
SgcbP82349 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
SgcbP82349 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC24.58■■□□□ 1.53
SgcbP82349 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC24.57■■□□□ 1.52
SgcbP82349 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC24.56■■□□□ 1.52
SgcbP82349 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC24.49■■□□□ 1.51
SgcbP82349 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
SgcbP82349 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC24.47■■□□□ 1.51
SgcbP82349 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC24.44■■□□□ 1.5
SgcbP82349 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
SgcbP82349 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC24.39■■□□□ 1.5
SgcbP82349 Gm26115-201ENSMUST00000175605 87 ntBASIC24.37■■□□□ 1.49
SgcbP82349 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC24.36■■□□□ 1.49
SgcbP82349 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
SgcbP82349 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
SgcbP82349 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
SgcbP82349 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
SgcbP82349 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
SgcbP82349 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
SgcbP82349 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
SgcbP82349 Gm8109-201ENSMUST00000194076 746 ntBASIC24.24■■□□□ 1.47
SgcbP82349 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
SgcbP82349 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC24.21■■□□□ 1.47
SgcbP82349 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC24.2■■□□□ 1.46
SgcbP82349 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
SgcbP82349 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC24.17■■□□□ 1.46
SgcbP82349 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
SgcbP82349 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
SgcbP82349 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC24.15■■□□□ 1.46
SgcbP82349 Gm17082-201ENSMUST00000166043 1091 ntBASIC24.15■■□□□ 1.46
SgcbP82349 Gm27322-201ENSMUST00000184007 104 ntBASIC24.12■■□□□ 1.45
SgcbP82349 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
SgcbP82349 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC24.11■■□□□ 1.45
SgcbP82349 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
SgcbP82349 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
SgcbP82349 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC24.09■■□□□ 1.45
SgcbP82349 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC24.03■■□□□ 1.44
SgcbP82349 Zfp131-207ENSMUST00000224946 1783 ntBASIC24.03■■□□□ 1.44
SgcbP82349 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
SgcbP82349 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC23.98■■□□□ 1.43
SgcbP82349 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC23.98■■□□□ 1.43
SgcbP82349 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC23.98■■□□□ 1.43
SgcbP82349 AL845457.1-201ENSMUST00000197244 68 ntBASIC23.96■■□□□ 1.43
SgcbP82349 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
SgcbP82349 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
SgcbP82349 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
SgcbP82349 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
SgcbP82349 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
SgcbP82349 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
SgcbP82349 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC23.8■■□□□ 1.4
SgcbP82349 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SgcbP82349 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
SgcbP82349 AC166822.3-201ENSMUST00000227394 661 ntBASIC23.75■■□□□ 1.39
SgcbP82349 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC23.75■■□□□ 1.39
SgcbP82349 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
SgcbP82349 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
SgcbP82349 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
SgcbP82349 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
SgcbP82349 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC23.71■■□□□ 1.39
SgcbP82349 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
SgcbP82349 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
SgcbP82349 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
SgcbP82349 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
SgcbP82349 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC23.62■■□□□ 1.37
SgcbP82349 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
SgcbP82349 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
SgcbP82349 Mipep-204ENSMUST00000225043 1548 ntBASIC23.58■■□□□ 1.36
SgcbP82349 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
SgcbP82349 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC23.55■■□□□ 1.36
SgcbP82349 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC23.54■■□□□ 1.36
SgcbP82349 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
SgcbP82349 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
SgcbP82349 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC23.53■■□□□ 1.36
SgcbP82349 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC23.52■■□□□ 1.36
SgcbP82349 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
SgcbP82349 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
SgcbP82349 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC23.49■■□□□ 1.35
SgcbP82349 Gm24804-201ENSMUST00000174982 85 ntBASIC23.49■■□□□ 1.35
SgcbP82349 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
SgcbP82349 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
SgcbP82349 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
SgcbP82349 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC23.45■■□□□ 1.35
SgcbP82349 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
SgcbP82349 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC23.43■■□□□ 1.34
SgcbP82349 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
SgcbP82349 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
SgcbP82349 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
SgcbP82349 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
SgcbP82349 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
SgcbP82349 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC23.37■■□□□ 1.33
SgcbP82349 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC23.35■■□□□ 1.33
SgcbP82349 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC23.34■■□□□ 1.33
SgcbP82349 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Retrieved 100 of 76,532 protein–RNA pairs in 13.9 ms