Protein–RNA interactions for Protein: P61025

Cks1b, Cyclin-dependent kinases regulatory subunit 1, mousemouse

Predictions only

Length 79 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1bP61025 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Cks1bP61025 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cks1bP61025 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cks1bP61025 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cks1bP61025 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cks1bP61025 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cks1bP61025 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cks1bP61025 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cks1bP61025 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cks1bP61025 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cks1bP61025 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cks1bP61025 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Cks1bP61025 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cks1bP61025 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Cks1bP61025 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cks1bP61025 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cks1bP61025 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Cks1bP61025 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cks1bP61025 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
Cks1bP61025 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cks1bP61025 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Cks1bP61025 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cks1bP61025 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cks1bP61025 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC18.69■□□□□ 0.58
Cks1bP61025 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cks1bP61025 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cks1bP61025 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cks1bP61025 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cks1bP61025 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC18.64■□□□□ 0.57
Cks1bP61025 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cks1bP61025 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cks1bP61025 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cks1bP61025 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.57
Cks1bP61025 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cks1bP61025 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Cks1bP61025 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cks1bP61025 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC18.57■□□□□ 0.56
Cks1bP61025 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cks1bP61025 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cks1bP61025 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cks1bP61025 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC18.53■□□□□ 0.56
Cks1bP61025 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cks1bP61025 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cks1bP61025 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Cks1bP61025 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cks1bP61025 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cks1bP61025 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cks1bP61025 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Cks1bP61025 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cks1bP61025 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cks1bP61025 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cks1bP61025 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cks1bP61025 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cks1bP61025 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cks1bP61025 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cks1bP61025 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cks1bP61025 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Cks1bP61025 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cks1bP61025 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cks1bP61025 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cks1bP61025 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.54
Cks1bP61025 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cks1bP61025 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Cks1bP61025 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cks1bP61025 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cks1bP61025 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cks1bP61025 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Cks1bP61025 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cks1bP61025 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Cks1bP61025 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Cks1bP61025 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cks1bP61025 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Cks1bP61025 Gm27325-201ENSMUST00000175467 74 ntBASIC18.32■□□□□ 0.52
Cks1bP61025 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cks1bP61025 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cks1bP61025 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cks1bP61025 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cks1bP61025 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cks1bP61025 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC18.26■□□□□ 0.51
Cks1bP61025 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cks1bP61025 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cks1bP61025 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Cks1bP61025 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cks1bP61025 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cks1bP61025 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cks1bP61025 AC153504.1-201ENSMUST00000218379 2290 ntBASIC18.19■□□□□ 0.5
Cks1bP61025 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cks1bP61025 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Cks1bP61025 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cks1bP61025 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cks1bP61025 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cks1bP61025 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Cks1bP61025 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Cks1bP61025 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cks1bP61025 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC18.14■□□□□ 0.49
Cks1bP61025 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Cks1bP61025 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cks1bP61025 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cks1bP61025 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cks1bP61025 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms