Protein–RNA interactions for Protein: P41272

Cd27, CD27 antigen, mousemouse

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd27P41272 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Cd27P41272 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC22.47■■□□□ 1.19
Cd27P41272 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Cd27P41272 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC22.47■■□□□ 1.19
Cd27P41272 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Cd27P41272 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
Cd27P41272 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Cd27P41272 Gm25262-201ENSMUST00000174934 133 ntBASIC22.39■■□□□ 1.17
Cd27P41272 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Cd27P41272 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Cd27P41272 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Cd27P41272 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.17
Cd27P41272 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Cd27P41272 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC22.29■■□□□ 1.16
Cd27P41272 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Cd27P41272 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Cd27P41272 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Cd27P41272 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Cd27P41272 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC22.22■■□□□ 1.15
Cd27P41272 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC22.2■■□□□ 1.14
Cd27P41272 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC22.2■■□□□ 1.14
Cd27P41272 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Cd27P41272 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Cd27P41272 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC22.14■■□□□ 1.13
Cd27P41272 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Cd27P41272 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC22.11■■□□□ 1.13
Cd27P41272 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Cd27P41272 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Cd27P41272 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC22.08■■□□□ 1.13
Cd27P41272 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Cd27P41272 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Cd27P41272 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Cd27P41272 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC22.04■■□□□ 1.12
Cd27P41272 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC22.03■■□□□ 1.12
Cd27P41272 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC22.02■■□□□ 1.12
Cd27P41272 Zfp131-207ENSMUST00000224946 1783 ntBASIC22.01■■□□□ 1.11
Cd27P41272 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC21.99■■□□□ 1.11
Cd27P41272 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Cd27P41272 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC21.9■■□□□ 1.1
Cd27P41272 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC21.9■■□□□ 1.1
Cd27P41272 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC21.9■■□□□ 1.1
Cd27P41272 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Cd27P41272 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Cd27P41272 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Cd27P41272 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Cd27P41272 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Cd27P41272 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Cd27P41272 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Cd27P41272 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Cd27P41272 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Cd27P41272 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Cd27P41272 Gm17082-201ENSMUST00000166043 1091 ntBASIC21.77■■□□□ 1.08
Cd27P41272 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
Cd27P41272 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Cd27P41272 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Cd27P41272 AL845457.1-201ENSMUST00000197244 68 ntBASIC21.71■■□□□ 1.07
Cd27P41272 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Cd27P41272 Gm26115-201ENSMUST00000175605 87 ntBASIC21.69■■□□□ 1.06
Cd27P41272 Gm8109-201ENSMUST00000194076 746 ntBASIC21.69■■□□□ 1.06
Cd27P41272 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Cd27P41272 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Cd27P41272 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Cd27P41272 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Cd27P41272 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Cd27P41272 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC21.64■■□□□ 1.05
Cd27P41272 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Cd27P41272 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Cd27P41272 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
Cd27P41272 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
Cd27P41272 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
Cd27P41272 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC21.61■■□□□ 1.05
Cd27P41272 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
Cd27P41272 Gm27322-201ENSMUST00000184007 104 ntBASIC21.59■■□□□ 1.05
Cd27P41272 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Cd27P41272 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Cd27P41272 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
Cd27P41272 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC21.55■■□□□ 1.04
Cd27P41272 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC21.52■■□□□ 1.04
Cd27P41272 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
Cd27P41272 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Cd27P41272 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Cd27P41272 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Cd27P41272 Mipep-204ENSMUST00000225043 1548 ntBASIC21.44■■□□□ 1.02
Cd27P41272 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Cd27P41272 AC166822.3-201ENSMUST00000227394 661 ntBASIC21.42■■□□□ 1.02
Cd27P41272 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Cd27P41272 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
Cd27P41272 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Cd27P41272 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
Cd27P41272 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Cd27P41272 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Cd27P41272 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Cd27P41272 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Cd27P41272 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC21.3■■□□□ 1
Cd27P41272 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC21.29■■□□□ 1
Cd27P41272 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC21.29■■□□□ 1
Cd27P41272 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC21.27■■□□□ 1
Cd27P41272 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Cd27P41272 Gm2415-204ENSMUST00000190235 2004 ntBASIC21.26■□□□□ 0.99
Cd27P41272 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC21.26■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 15.2 ms