Protein–RNA interactions for Protein: P08775

Polr2a, DNA-directed RNA polymerase II subunit RPB1, mousemouse

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr2aP08775 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC33.45■■■□□ 2.94
Polr2aP08775 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC33.43■■■□□ 2.94
Polr2aP08775 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC33.4■■■□□ 2.94
Polr2aP08775 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC33.36■■■□□ 2.93
Polr2aP08775 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC33.35■■■□□ 2.93
Polr2aP08775 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC33.35■■■□□ 2.93
Polr2aP08775 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC33.29■■■□□ 2.92
Polr2aP08775 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC33.28■■■□□ 2.92
Polr2aP08775 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC33.27■■■□□ 2.92
Polr2aP08775 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC33.23■■■□□ 2.91
Polr2aP08775 Zfp131-205ENSMUST00000223812 663 ntBASIC33.23■■■□□ 2.91
Polr2aP08775 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC33.17■■■□□ 2.9
Polr2aP08775 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC33.13■■■□□ 2.89
Polr2aP08775 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC33.13■■■□□ 2.89
Polr2aP08775 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC33.1■■■□□ 2.89
Polr2aP08775 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC33.09■■■□□ 2.89
Polr2aP08775 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC33.07■■■□□ 2.88
Polr2aP08775 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC33■■■□□ 2.87
Polr2aP08775 Gm42596-201ENSMUST00000196305 1958 ntBASIC33■■■□□ 2.87
Polr2aP08775 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC32.99■■■□□ 2.87
Polr2aP08775 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC32.98■■■□□ 2.87
Polr2aP08775 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC32.98■■■□□ 2.87
Polr2aP08775 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC32.98■■■□□ 2.87
Polr2aP08775 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC32.96■■■□□ 2.87
Polr2aP08775 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC32.94■■■□□ 2.86
Polr2aP08775 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC32.85■■■□□ 2.85
Polr2aP08775 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC32.84■■■□□ 2.85
Polr2aP08775 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC32.83■■■□□ 2.85
Polr2aP08775 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC32.83■■■□□ 2.85
Polr2aP08775 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC32.82■■■□□ 2.84
Polr2aP08775 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC32.78■■■□□ 2.84
Polr2aP08775 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC32.78■■■□□ 2.84
Polr2aP08775 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC32.74■■■□□ 2.83
Polr2aP08775 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC32.73■■■□□ 2.83
Polr2aP08775 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC32.73■■■□□ 2.83
Polr2aP08775 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC32.72■■■□□ 2.83
Polr2aP08775 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC32.72■■■□□ 2.83
Polr2aP08775 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC32.7■■■□□ 2.83
Polr2aP08775 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC32.67■■■□□ 2.82
Polr2aP08775 Gm10524-201ENSMUST00000181931 1893 ntBASIC32.64■■■□□ 2.82
Polr2aP08775 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC32.63■■■□□ 2.81
Polr2aP08775 CT025624.2-201ENSMUST00000223609 1909 ntBASIC32.62■■■□□ 2.81
Polr2aP08775 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC32.61■■■□□ 2.81
Polr2aP08775 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC32.61■■■□□ 2.81
Polr2aP08775 AC166822.3-201ENSMUST00000227394 661 ntBASIC32.61■■■□□ 2.81
Polr2aP08775 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC32.6■■■□□ 2.81
Polr2aP08775 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC32.57■■■□□ 2.8
Polr2aP08775 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC32.56■■■□□ 2.8
Polr2aP08775 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC32.55■■■□□ 2.8
Polr2aP08775 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC32.49■■■□□ 2.79
Polr2aP08775 AL845457.1-201ENSMUST00000197244 68 ntBASIC32.49■■■□□ 2.79
Polr2aP08775 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC32.48■■■□□ 2.79
Polr2aP08775 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC32.45■■■□□ 2.78
Polr2aP08775 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC32.44■■■□□ 2.78
Polr2aP08775 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC32.43■■■□□ 2.78
Polr2aP08775 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC32.39■■■□□ 2.78
Polr2aP08775 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC32.38■■■□□ 2.77
Polr2aP08775 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC32.38■■■□□ 2.77
Polr2aP08775 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC32.34■■■□□ 2.77
Polr2aP08775 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC32.34■■■□□ 2.77
Polr2aP08775 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC32.29■■■□□ 2.76
Polr2aP08775 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC32.28■■■□□ 2.76
Polr2aP08775 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.75
Polr2aP08775 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC32.21■■■□□ 2.75
Polr2aP08775 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC32.17■■■□□ 2.74
Polr2aP08775 Gm16148-201ENSMUST00000119653 893 ntBASIC32.16■■■□□ 2.74
Polr2aP08775 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC32.15■■■□□ 2.74
Polr2aP08775 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC32.14■■■□□ 2.74
Polr2aP08775 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC32.09■■■□□ 2.73
Polr2aP08775 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC32.08■■■□□ 2.73
Polr2aP08775 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC32.07■■■□□ 2.72
Polr2aP08775 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC32.07■■■□□ 2.72
Polr2aP08775 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC32.06■■■□□ 2.72
Polr2aP08775 Tdp2-203ENSMUST00000223804 1136 ntBASIC32.05■■■□□ 2.72
Polr2aP08775 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
Polr2aP08775 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC32.01■■■□□ 2.72
Polr2aP08775 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC32.01■■■□□ 2.72
Polr2aP08775 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC31.97■■■□□ 2.71
Polr2aP08775 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC31.96■■■□□ 2.71
Polr2aP08775 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC31.94■■■□□ 2.7
Polr2aP08775 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC31.94■■■□□ 2.7
Polr2aP08775 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC31.93■■■□□ 2.7
Polr2aP08775 Peli2-204ENSMUST00000226513 1320 ntBASIC31.92■■■□□ 2.7
Polr2aP08775 Zfp131-207ENSMUST00000224946 1783 ntBASIC31.92■■■□□ 2.7
Polr2aP08775 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC31.91■■■□□ 2.7
Polr2aP08775 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC31.91■■■□□ 2.7
Polr2aP08775 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
Polr2aP08775 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC31.9■■■□□ 2.7
Polr2aP08775 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
Polr2aP08775 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
Polr2aP08775 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC31.86■■■□□ 2.69
Polr2aP08775 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
Polr2aP08775 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC31.85■■■□□ 2.69
Polr2aP08775 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC31.85■■■□□ 2.69
Polr2aP08775 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC31.84■■■□□ 2.69
Polr2aP08775 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC31.84■■■□□ 2.69
Polr2aP08775 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC31.83■■■□□ 2.69
Polr2aP08775 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
Polr2aP08775 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC31.8■■■□□ 2.68
Polr2aP08775 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC31.77■■■□□ 2.68
Retrieved 100 of 76,532 protein–RNA pairs in 81.4 ms