Protein–RNA interactions for Protein: P06323

T-cell receptor alpha chain V region CTL-F3, mousemouse

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06323 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
P06323 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
P06323 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
P06323 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
P06323 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
P06323 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC21.92■■□□□ 1.1
P06323 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC21.91■■□□□ 1.1
P06323 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
P06323 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC21.88■■□□□ 1.09
P06323 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
P06323 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
P06323 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC21.86■■□□□ 1.09
P06323 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
P06323 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC21.78■■□□□ 1.08
P06323 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
P06323 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
P06323 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
P06323 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC21.68■■□□□ 1.06
P06323 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC21.67■■□□□ 1.06
P06323 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
P06323 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
P06323 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC21.64■■□□□ 1.06
P06323 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
P06323 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC21.59■■□□□ 1.05
P06323 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
P06323 Rab21-202ENSMUST00000218831 843 ntBASIC21.58■■□□□ 1.05
P06323 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
P06323 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
P06323 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC21.53■■□□□ 1.04
P06323 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
P06323 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
P06323 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.03
P06323 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
P06323 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
P06323 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
P06323 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
P06323 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
P06323 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
P06323 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
P06323 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
P06323 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC21.44■■□□□ 1.02
P06323 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC21.44■■□□□ 1.02
P06323 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
P06323 Zfp131-207ENSMUST00000224946 1783 ntBASIC21.43■■□□□ 1.02
P06323 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
P06323 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC21.41■■□□□ 1.02
P06323 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
P06323 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC21.38■■□□□ 1.01
P06323 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
P06323 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
P06323 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC21.37■■□□□ 1.01
P06323 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
P06323 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
P06323 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
P06323 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
P06323 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC21.32■■□□□ 1
P06323 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
P06323 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
P06323 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
P06323 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
P06323 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC21.25■□□□□ 0.99
P06323 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
P06323 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
P06323 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
P06323 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
P06323 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC21.2■□□□□ 0.98
P06323 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
P06323 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
P06323 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
P06323 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
P06323 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
P06323 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
P06323 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
P06323 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
P06323 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
P06323 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
P06323 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
P06323 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
P06323 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
P06323 Gm25262-201ENSMUST00000174934 133 ntBASIC21.05■□□□□ 0.96
P06323 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
P06323 Gm2415-204ENSMUST00000190235 2004 ntBASIC21.03■□□□□ 0.96
P06323 AC153504.1-201ENSMUST00000218379 2290 ntBASIC21.02■□□□□ 0.95
P06323 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.95
P06323 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
P06323 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
P06323 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
P06323 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
P06323 AL845457.1-201ENSMUST00000197244 68 ntBASIC20.94■□□□□ 0.94
P06323 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
P06323 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC20.93■□□□□ 0.94
P06323 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC20.92■□□□□ 0.94
P06323 Gm6658-202ENSMUST00000209493 1885 ntBASIC20.92■□□□□ 0.94
P06323 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
P06323 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
P06323 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
P06323 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
P06323 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
P06323 Mipep-204ENSMUST00000225043 1548 ntBASIC20.83■□□□□ 0.93
P06323 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms