Protein–RNA interactions for Protein: P05213

Tuba1b, Tubulin alpha-1B chain, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tuba1bP05213 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC25.14■■□□□ 1.62
Tuba1bP05213 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Tuba1bP05213 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC25.11■■□□□ 1.61
Tuba1bP05213 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC25.11■■□□□ 1.61
Tuba1bP05213 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Tuba1bP05213 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
Tuba1bP05213 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC25.05■■□□□ 1.6
Tuba1bP05213 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC25.02■■□□□ 1.6
Tuba1bP05213 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Tuba1bP05213 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC25■■□□□ 1.59
Tuba1bP05213 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC25■■□□□ 1.59
Tuba1bP05213 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC25■■□□□ 1.59
Tuba1bP05213 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC25■■□□□ 1.59
Tuba1bP05213 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC24.93■■□□□ 1.58
Tuba1bP05213 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
Tuba1bP05213 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC24.93■■□□□ 1.58
Tuba1bP05213 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC24.92■■□□□ 1.58
Tuba1bP05213 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
Tuba1bP05213 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
Tuba1bP05213 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC24.89■■□□□ 1.58
Tuba1bP05213 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC24.88■■□□□ 1.57
Tuba1bP05213 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Tuba1bP05213 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Tuba1bP05213 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
Tuba1bP05213 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
Tuba1bP05213 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC24.84■■□□□ 1.57
Tuba1bP05213 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC24.72■■□□□ 1.55
Tuba1bP05213 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC24.72■■□□□ 1.55
Tuba1bP05213 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Tuba1bP05213 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Tuba1bP05213 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC24.64■■□□□ 1.54
Tuba1bP05213 Rab21-202ENSMUST00000218831 843 ntBASIC24.64■■□□□ 1.54
Tuba1bP05213 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC24.63■■□□□ 1.53
Tuba1bP05213 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Tuba1bP05213 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Tuba1bP05213 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC24.55■■□□□ 1.52
Tuba1bP05213 AC153504.1-201ENSMUST00000218379 2290 ntBASIC24.55■■□□□ 1.52
Tuba1bP05213 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC24.55■■□□□ 1.52
Tuba1bP05213 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Tuba1bP05213 Gm25262-201ENSMUST00000174934 133 ntBASIC24.5■■□□□ 1.51
Tuba1bP05213 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Tuba1bP05213 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Tuba1bP05213 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC24.43■■□□□ 1.5
Tuba1bP05213 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
Tuba1bP05213 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Tuba1bP05213 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC24.39■■□□□ 1.49
Tuba1bP05213 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC24.37■■□□□ 1.49
Tuba1bP05213 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC24.37■■□□□ 1.49
Tuba1bP05213 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Tuba1bP05213 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
Tuba1bP05213 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
Tuba1bP05213 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Tuba1bP05213 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Tuba1bP05213 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
Tuba1bP05213 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Tuba1bP05213 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
Tuba1bP05213 Gm2415-204ENSMUST00000190235 2004 ntBASIC24.27■■□□□ 1.48
Tuba1bP05213 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Tuba1bP05213 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC24.24■■□□□ 1.47
Tuba1bP05213 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC24.24■■□□□ 1.47
Tuba1bP05213 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Tuba1bP05213 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC24.21■■□□□ 1.47
Tuba1bP05213 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Tuba1bP05213 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC24.15■■□□□ 1.46
Tuba1bP05213 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC24.15■■□□□ 1.46
Tuba1bP05213 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Tuba1bP05213 Zxda-201ENSMUST00000117281 2621 ntBASIC24.13■■□□□ 1.45
Tuba1bP05213 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC24.13■■□□□ 1.45
Tuba1bP05213 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
Tuba1bP05213 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC24.12■■□□□ 1.45
Tuba1bP05213 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC24.11■■□□□ 1.45
Tuba1bP05213 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC24.11■■□□□ 1.45
Tuba1bP05213 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC24.09■■□□□ 1.45
Tuba1bP05213 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC24.08■■□□□ 1.44
Tuba1bP05213 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC24.07■■□□□ 1.44
Tuba1bP05213 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Tuba1bP05213 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
Tuba1bP05213 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Tuba1bP05213 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Tuba1bP05213 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
Tuba1bP05213 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC24.01■■□□□ 1.43
Tuba1bP05213 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC24■■□□□ 1.43
Tuba1bP05213 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC24■■□□□ 1.43
Tuba1bP05213 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC24■■□□□ 1.43
Tuba1bP05213 Gm6658-202ENSMUST00000209493 1885 ntBASIC23.98■■□□□ 1.43
Tuba1bP05213 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC23.98■■□□□ 1.43
Tuba1bP05213 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Tuba1bP05213 Gm9905-201ENSMUST00000065740 1845 ntBASIC23.96■■□□□ 1.43
Tuba1bP05213 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Tuba1bP05213 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
Tuba1bP05213 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
Tuba1bP05213 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Tuba1bP05213 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Tuba1bP05213 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
Tuba1bP05213 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC23.93■■□□□ 1.42
Tuba1bP05213 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC23.93■■□□□ 1.42
Tuba1bP05213 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Tuba1bP05213 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Tuba1bP05213 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Tuba1bP05213 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC23.88■■□□□ 1.41
Retrieved 100 of 76,532 protein–RNA pairs in 49.4 ms