Protein–RNA interactions for Protein: O88895

Hdac3, Histone deacetylase 3, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac3O88895 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Hdac3O88895 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC24.27■■□□□ 1.48
Hdac3O88895 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC24.27■■□□□ 1.48
Hdac3O88895 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC24.25■■□□□ 1.47
Hdac3O88895 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Hdac3O88895 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Hdac3O88895 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC24.21■■□□□ 1.47
Hdac3O88895 Rab21-202ENSMUST00000218831 843 ntBASIC24.2■■□□□ 1.46
Hdac3O88895 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
Hdac3O88895 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
Hdac3O88895 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC24.13■■□□□ 1.45
Hdac3O88895 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Hdac3O88895 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
Hdac3O88895 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC24.07■■□□□ 1.44
Hdac3O88895 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC24.06■■□□□ 1.44
Hdac3O88895 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC24.05■■□□□ 1.44
Hdac3O88895 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC24.05■■□□□ 1.44
Hdac3O88895 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Hdac3O88895 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC24.03■■□□□ 1.44
Hdac3O88895 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Hdac3O88895 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Hdac3O88895 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC23.99■■□□□ 1.43
Hdac3O88895 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC23.97■■□□□ 1.43
Hdac3O88895 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC23.96■■□□□ 1.43
Hdac3O88895 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
Hdac3O88895 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
Hdac3O88895 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC23.88■■□□□ 1.41
Hdac3O88895 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Hdac3O88895 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
Hdac3O88895 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Hdac3O88895 Gm25262-201ENSMUST00000174934 133 ntBASIC23.84■■□□□ 1.41
Hdac3O88895 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Hdac3O88895 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Hdac3O88895 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Hdac3O88895 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Hdac3O88895 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC23.78■■□□□ 1.4
Hdac3O88895 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Hdac3O88895 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Hdac3O88895 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Hdac3O88895 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Hdac3O88895 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC23.73■■□□□ 1.39
Hdac3O88895 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC23.72■■□□□ 1.39
Hdac3O88895 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC23.71■■□□□ 1.39
Hdac3O88895 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC23.71■■□□□ 1.39
Hdac3O88895 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.38
Hdac3O88895 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC23.7■■□□□ 1.38
Hdac3O88895 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Hdac3O88895 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
Hdac3O88895 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC23.67■■□□□ 1.38
Hdac3O88895 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
Hdac3O88895 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC23.63■■□□□ 1.37
Hdac3O88895 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC23.62■■□□□ 1.37
Hdac3O88895 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC23.61■■□□□ 1.37
Hdac3O88895 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
Hdac3O88895 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Hdac3O88895 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
Hdac3O88895 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC23.57■■□□□ 1.36
Hdac3O88895 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Hdac3O88895 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC23.55■■□□□ 1.36
Hdac3O88895 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC23.53■■□□□ 1.36
Hdac3O88895 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Hdac3O88895 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Hdac3O88895 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Hdac3O88895 Zfp131-207ENSMUST00000224946 1783 ntBASIC23.48■■□□□ 1.35
Hdac3O88895 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC23.48■■□□□ 1.35
Hdac3O88895 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC23.39■■□□□ 1.33
Hdac3O88895 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
Hdac3O88895 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC23.36■■□□□ 1.33
Hdac3O88895 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC23.34■■□□□ 1.33
Hdac3O88895 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Hdac3O88895 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Hdac3O88895 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Hdac3O88895 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Hdac3O88895 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Hdac3O88895 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC23.26■■□□□ 1.31
Hdac3O88895 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Hdac3O88895 AC153504.1-201ENSMUST00000218379 2290 ntBASIC23.25■■□□□ 1.31
Hdac3O88895 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Hdac3O88895 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC23.25■■□□□ 1.31
Hdac3O88895 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC23.24■■□□□ 1.31
Hdac3O88895 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Hdac3O88895 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Hdac3O88895 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Hdac3O88895 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC23.18■■□□□ 1.3
Hdac3O88895 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC23.18■■□□□ 1.3
Hdac3O88895 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Hdac3O88895 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Hdac3O88895 AL845457.1-201ENSMUST00000197244 68 ntBASIC23.15■■□□□ 1.3
Hdac3O88895 Gm17082-201ENSMUST00000166043 1091 ntBASIC23.13■■□□□ 1.29
Hdac3O88895 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Hdac3O88895 Gm2415-204ENSMUST00000190235 2004 ntBASIC23.13■■□□□ 1.29
Hdac3O88895 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC23.11■■□□□ 1.29
Hdac3O88895 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC23.09■■□□□ 1.29
Hdac3O88895 Gm27322-201ENSMUST00000184007 104 ntBASIC23.09■■□□□ 1.29
Hdac3O88895 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Hdac3O88895 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Hdac3O88895 Gm26115-201ENSMUST00000175605 87 ntBASIC23.07■■□□□ 1.28
Hdac3O88895 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC23.06■■□□□ 1.28
Hdac3O88895 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC23.06■■□□□ 1.28
Hdac3O88895 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC23.06■■□□□ 1.28
Retrieved 100 of 76,532 protein–RNA pairs in 812.9 ms