Protein–RNA interactions for Protein: O88870

Best1, Bestrophin-1, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Best1O88870 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC27.33■■□□□ 1.97
Best1O88870 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC27.3■■□□□ 1.96
Best1O88870 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
Best1O88870 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC27.3■■□□□ 1.96
Best1O88870 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
Best1O88870 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
Best1O88870 Gm26115-201ENSMUST00000175605 87 ntBASIC27.25■■□□□ 1.95
Best1O88870 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
Best1O88870 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC27.2■■□□□ 1.94
Best1O88870 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
Best1O88870 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
Best1O88870 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
Best1O88870 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
Best1O88870 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC27.12■■□□□ 1.93
Best1O88870 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
Best1O88870 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
Best1O88870 Gm8109-201ENSMUST00000194076 746 ntBASIC27.08■■□□□ 1.93
Best1O88870 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
Best1O88870 Gm17082-201ENSMUST00000166043 1091 ntBASIC26.99■■□□□ 1.91
Best1O88870 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
Best1O88870 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC26.96■■□□□ 1.91
Best1O88870 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
Best1O88870 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
Best1O88870 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC26.92■■□□□ 1.9
Best1O88870 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC26.91■■□□□ 1.9
Best1O88870 Gm27322-201ENSMUST00000184007 104 ntBASIC26.83■■□□□ 1.89
Best1O88870 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC26.82■■□□□ 1.88
Best1O88870 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC26.79■■□□□ 1.88
Best1O88870 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC26.78■■□□□ 1.88
Best1O88870 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC26.78■■□□□ 1.88
Best1O88870 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC26.78■■□□□ 1.88
Best1O88870 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
Best1O88870 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
Best1O88870 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC26.7■■□□□ 1.87
Best1O88870 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC26.68■■□□□ 1.86
Best1O88870 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
Best1O88870 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Best1O88870 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC26.65■■□□□ 1.86
Best1O88870 Zfp131-207ENSMUST00000224946 1783 ntBASIC26.58■■□□□ 1.85
Best1O88870 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Best1O88870 AL845457.1-201ENSMUST00000197244 68 ntBASIC26.56■■□□□ 1.84
Best1O88870 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Best1O88870 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Best1O88870 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
Best1O88870 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC26.51■■□□□ 1.83
Best1O88870 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Best1O88870 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC26.47■■□□□ 1.83
Best1O88870 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC26.47■■□□□ 1.83
Best1O88870 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC26.47■■□□□ 1.83
Best1O88870 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
Best1O88870 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC26.44■■□□□ 1.82
Best1O88870 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Best1O88870 AC166822.3-201ENSMUST00000227394 661 ntBASIC26.43■■□□□ 1.82
Best1O88870 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC26.42■■□□□ 1.82
Best1O88870 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Best1O88870 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Best1O88870 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
Best1O88870 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Best1O88870 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Best1O88870 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC26.3■■□□□ 1.8
Best1O88870 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
Best1O88870 Gm24804-201ENSMUST00000174982 85 ntBASIC26.29■■□□□ 1.8
Best1O88870 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
Best1O88870 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Best1O88870 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
Best1O88870 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC26.19■■□□□ 1.78
Best1O88870 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
Best1O88870 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
Best1O88870 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC26.1■■□□□ 1.77
Best1O88870 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Best1O88870 Mipep-204ENSMUST00000225043 1548 ntBASIC26.07■■□□□ 1.76
Best1O88870 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC26.06■■□□□ 1.76
Best1O88870 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Best1O88870 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Best1O88870 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Best1O88870 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Best1O88870 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC26.03■■□□□ 1.76
Best1O88870 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
Best1O88870 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
Best1O88870 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
Best1O88870 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC26■■□□□ 1.75
Best1O88870 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC26■■□□□ 1.75
Best1O88870 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
Best1O88870 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
Best1O88870 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
Best1O88870 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
Best1O88870 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
Best1O88870 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
Best1O88870 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC25.89■■□□□ 1.74
Best1O88870 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC25.89■■□□□ 1.74
Best1O88870 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
Best1O88870 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
Best1O88870 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC25.87■■□□□ 1.73
Best1O88870 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
Best1O88870 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
Best1O88870 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC25.83■■□□□ 1.73
Best1O88870 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
Best1O88870 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
Best1O88870 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC25.81■■□□□ 1.72
Best1O88870 Peli2-204ENSMUST00000226513 1320 ntBASIC25.81■■□□□ 1.72
Retrieved 100 of 76,532 protein–RNA pairs in 15.1 ms