Protein–RNA interactions for Protein: O88632

Sema3f, Semaphorin-3F, mousemouse

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sema3fO88632 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC32.8■■■□□ 2.84
Sema3fO88632 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC32.8■■■□□ 2.84
Sema3fO88632 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC32.77■■■□□ 2.84
Sema3fO88632 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC32.76■■■□□ 2.84
Sema3fO88632 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC32.69■■■□□ 2.82
Sema3fO88632 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC32.68■■■□□ 2.82
Sema3fO88632 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC32.61■■■□□ 2.81
Sema3fO88632 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC32.61■■■□□ 2.81
Sema3fO88632 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC32.6■■■□□ 2.81
Sema3fO88632 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC32.53■■■□□ 2.8
Sema3fO88632 Gm17082-201ENSMUST00000166043 1091 ntBASIC32.52■■■□□ 2.8
Sema3fO88632 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC32.5■■■□□ 2.79
Sema3fO88632 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC32.49■■■□□ 2.79
Sema3fO88632 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC32.43■■■□□ 2.78
Sema3fO88632 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC32.43■■■□□ 2.78
Sema3fO88632 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC32.41■■■□□ 2.78
Sema3fO88632 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC32.4■■■□□ 2.78
Sema3fO88632 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC32.35■■■□□ 2.77
Sema3fO88632 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC32.34■■■□□ 2.77
Sema3fO88632 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC32.33■■■□□ 2.77
Sema3fO88632 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.75
Sema3fO88632 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC32.25■■■□□ 2.75
Sema3fO88632 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC32.23■■■□□ 2.75
Sema3fO88632 Gm27322-201ENSMUST00000184007 104 ntBASIC32.18■■■□□ 2.74
Sema3fO88632 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC32.18■■■□□ 2.74
Sema3fO88632 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC32.14■■■□□ 2.74
Sema3fO88632 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC32.12■■■□□ 2.73
Sema3fO88632 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC32.1■■■□□ 2.73
Sema3fO88632 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC32.09■■■□□ 2.73
Sema3fO88632 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC32.08■■■□□ 2.73
Sema3fO88632 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC32.05■■■□□ 2.72
Sema3fO88632 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC31.92■■■□□ 2.7
Sema3fO88632 Gm24804-201ENSMUST00000174982 85 ntBASIC31.87■■■□□ 2.69
Sema3fO88632 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC31.87■■■□□ 2.69
Sema3fO88632 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
Sema3fO88632 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC31.85■■■□□ 2.69
Sema3fO88632 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
Sema3fO88632 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC31.82■■■□□ 2.68
Sema3fO88632 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
Sema3fO88632 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC31.81■■■□□ 2.68
Sema3fO88632 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC31.8■■■□□ 2.68
Sema3fO88632 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
Sema3fO88632 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
Sema3fO88632 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.68
Sema3fO88632 AL845457.1-201ENSMUST00000197244 68 ntBASIC31.75■■■□□ 2.67
Sema3fO88632 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC31.75■■■□□ 2.67
Sema3fO88632 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
Sema3fO88632 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC31.71■■■□□ 2.67
Sema3fO88632 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC31.71■■■□□ 2.67
Sema3fO88632 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC31.7■■■□□ 2.67
Sema3fO88632 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
Sema3fO88632 Zfp131-207ENSMUST00000224946 1783 ntBASIC31.66■■■□□ 2.66
Sema3fO88632 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC31.66■■■□□ 2.66
Sema3fO88632 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC31.65■■■□□ 2.66
Sema3fO88632 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC31.63■■■□□ 2.65
Sema3fO88632 AC166822.3-201ENSMUST00000227394 661 ntBASIC31.62■■■□□ 2.65
Sema3fO88632 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC31.57■■■□□ 2.64
Sema3fO88632 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
Sema3fO88632 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC31.5■■■□□ 2.63
Sema3fO88632 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC31.47■■■□□ 2.63
Sema3fO88632 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC31.43■■■□□ 2.62
Sema3fO88632 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
Sema3fO88632 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC31.39■■■□□ 2.62
Sema3fO88632 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC31.36■■■□□ 2.61
Sema3fO88632 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
Sema3fO88632 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
Sema3fO88632 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
Sema3fO88632 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
Sema3fO88632 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
Sema3fO88632 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
Sema3fO88632 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
Sema3fO88632 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC31.26■■■□□ 2.59
Sema3fO88632 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
Sema3fO88632 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
Sema3fO88632 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC31.2■■■□□ 2.59
Sema3fO88632 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
Sema3fO88632 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC31.19■■■□□ 2.58
Sema3fO88632 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC31.15■■■□□ 2.58
Sema3fO88632 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
Sema3fO88632 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
Sema3fO88632 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
Sema3fO88632 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC31.12■■■□□ 2.57
Sema3fO88632 Mipep-204ENSMUST00000225043 1548 ntBASIC31.04■■■□□ 2.56
Sema3fO88632 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
Sema3fO88632 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC31.03■■■□□ 2.56
Sema3fO88632 Zfp131-205ENSMUST00000223812 663 ntBASIC31■■■□□ 2.55
Sema3fO88632 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
Sema3fO88632 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.54
Sema3fO88632 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
Sema3fO88632 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
Sema3fO88632 Peli2-204ENSMUST00000226513 1320 ntBASIC30.93■■■□□ 2.54
Sema3fO88632 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC30.93■■■□□ 2.54
Sema3fO88632 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC30.91■■■□□ 2.54
Sema3fO88632 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC30.91■■■□□ 2.54
Sema3fO88632 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC30.9■■■□□ 2.54
Sema3fO88632 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
Sema3fO88632 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC30.89■■■□□ 2.53
Sema3fO88632 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC30.88■■■□□ 2.53
Sema3fO88632 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC30.88■■■□□ 2.53
Sema3fO88632 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC30.87■■■□□ 2.53
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms