Protein–RNA interactions for Protein: O88520

Shoc2, Leucine-rich repeat protein SHOC-2, mousemouse

Known RBP Predictions only

Length 582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shoc2O88520 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC28.52■■■□□ 2.16
Shoc2O88520 Rab21-202ENSMUST00000218831 843 ntBASIC28.52■■■□□ 2.16
Shoc2O88520 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC28.52■■■□□ 2.16
Shoc2O88520 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
Shoc2O88520 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
Shoc2O88520 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC28.46■■■□□ 2.15
Shoc2O88520 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC28.44■■■□□ 2.14
Shoc2O88520 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
Shoc2O88520 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
Shoc2O88520 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
Shoc2O88520 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC28.4■■■□□ 2.14
Shoc2O88520 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
Shoc2O88520 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC28.39■■■□□ 2.14
Shoc2O88520 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
Shoc2O88520 Gm25262-201ENSMUST00000174934 133 ntBASIC28.29■■■□□ 2.12
Shoc2O88520 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC28.28■■■□□ 2.12
Shoc2O88520 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC28.27■■■□□ 2.12
Shoc2O88520 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
Shoc2O88520 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC28.25■■■□□ 2.11
Shoc2O88520 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC28.22■■■□□ 2.11
Shoc2O88520 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC28.21■■■□□ 2.11
Shoc2O88520 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC28.21■■■□□ 2.11
Shoc2O88520 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC28.19■■■□□ 2.1
Shoc2O88520 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC28.18■■■□□ 2.1
Shoc2O88520 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
Shoc2O88520 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
Shoc2O88520 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC28.05■■■□□ 2.08
Shoc2O88520 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
Shoc2O88520 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
Shoc2O88520 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
Shoc2O88520 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
Shoc2O88520 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC28■■■□□ 2.07
Shoc2O88520 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
Shoc2O88520 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC27.97■■■□□ 2.07
Shoc2O88520 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC27.97■■■□□ 2.07
Shoc2O88520 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC27.94■■■□□ 2.06
Shoc2O88520 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC27.92■■■□□ 2.06
Shoc2O88520 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC27.9■■■□□ 2.06
Shoc2O88520 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC27.89■■■□□ 2.06
Shoc2O88520 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC27.87■■■□□ 2.05
Shoc2O88520 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC27.87■■■□□ 2.05
Shoc2O88520 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC27.84■■■□□ 2.05
Shoc2O88520 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
Shoc2O88520 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
Shoc2O88520 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC27.76■■■□□ 2.03
Shoc2O88520 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC27.74■■■□□ 2.03
Shoc2O88520 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC27.73■■■□□ 2.03
Shoc2O88520 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
Shoc2O88520 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
Shoc2O88520 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC27.68■■■□□ 2.02
Shoc2O88520 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC27.68■■■□□ 2.02
Shoc2O88520 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC27.68■■■□□ 2.02
Shoc2O88520 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC27.67■■■□□ 2.02
Shoc2O88520 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
Shoc2O88520 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC27.66■■■□□ 2.02
Shoc2O88520 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC27.65■■■□□ 2.02
Shoc2O88520 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC27.61■■■□□ 2.01
Shoc2O88520 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
Shoc2O88520 Zfp131-207ENSMUST00000224946 1783 ntBASIC27.6■■■□□ 2.01
Shoc2O88520 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC27.55■■■□□ 2
Shoc2O88520 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC27.54■■■□□ 2
Shoc2O88520 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
Shoc2O88520 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
Shoc2O88520 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC27.5■■□□□ 1.99
Shoc2O88520 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
Shoc2O88520 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC27.45■■□□□ 1.98
Shoc2O88520 Gm26115-201ENSMUST00000175605 87 ntBASIC27.43■■□□□ 1.98
Shoc2O88520 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
Shoc2O88520 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC27.38■■□□□ 1.97
Shoc2O88520 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
Shoc2O88520 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
Shoc2O88520 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
Shoc2O88520 Gm17082-201ENSMUST00000166043 1091 ntBASIC27.36■■□□□ 1.97
Shoc2O88520 Gm8109-201ENSMUST00000194076 746 ntBASIC27.36■■□□□ 1.97
Shoc2O88520 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
Shoc2O88520 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
Shoc2O88520 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
Shoc2O88520 Gm2415-204ENSMUST00000190235 2004 ntBASIC27.34■■□□□ 1.97
Shoc2O88520 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
Shoc2O88520 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
Shoc2O88520 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC27.29■■□□□ 1.96
Shoc2O88520 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
Shoc2O88520 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
Shoc2O88520 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC27.27■■□□□ 1.96
Shoc2O88520 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
Shoc2O88520 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
Shoc2O88520 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
Shoc2O88520 Gm27322-201ENSMUST00000184007 104 ntBASIC27.25■■□□□ 1.95
Shoc2O88520 AL845457.1-201ENSMUST00000197244 68 ntBASIC27.25■■□□□ 1.95
Shoc2O88520 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC27.23■■□□□ 1.95
Shoc2O88520 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC27.22■■□□□ 1.95
Shoc2O88520 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
Shoc2O88520 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC27.17■■□□□ 1.94
Shoc2O88520 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
Shoc2O88520 Gm6658-202ENSMUST00000209493 1885 ntBASIC27.15■■□□□ 1.94
Shoc2O88520 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
Shoc2O88520 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC27.14■■□□□ 1.93
Shoc2O88520 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
Shoc2O88520 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
Shoc2O88520 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC27.05■■□□□ 1.92
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms