Protein–RNA interactions for Protein: O88253

Gm10226, Mszf39 (Fragment), mousemouse

Predictions only

Length 85 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm10226O88253 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Gm10226O88253 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC21.79■■□□□ 1.08
Gm10226O88253 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
Gm10226O88253 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC21.77■■□□□ 1.08
Gm10226O88253 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Gm10226O88253 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
Gm10226O88253 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC21.73■■□□□ 1.07
Gm10226O88253 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Gm10226O88253 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
Gm10226O88253 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Gm10226O88253 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC21.69■■□□□ 1.06
Gm10226O88253 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC21.64■■□□□ 1.05
Gm10226O88253 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Gm10226O88253 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
Gm10226O88253 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Gm10226O88253 Gm26115-201ENSMUST00000175605 87 ntBASIC21.56■■□□□ 1.04
Gm10226O88253 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Gm10226O88253 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Gm10226O88253 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Gm10226O88253 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Gm10226O88253 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
Gm10226O88253 Gm8109-201ENSMUST00000194076 746 ntBASIC21.45■■□□□ 1.02
Gm10226O88253 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC21.43■■□□□ 1.02
Gm10226O88253 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC21.43■■□□□ 1.02
Gm10226O88253 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Gm10226O88253 Gm17082-201ENSMUST00000166043 1091 ntBASIC21.42■■□□□ 1.02
Gm10226O88253 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Gm10226O88253 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC21.39■■□□□ 1.01
Gm10226O88253 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Gm10226O88253 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Gm10226O88253 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Gm10226O88253 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Gm10226O88253 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Gm10226O88253 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC21.32■■□□□ 1
Gm10226O88253 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Gm10226O88253 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
Gm10226O88253 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
Gm10226O88253 Gm27322-201ENSMUST00000184007 104 ntBASIC21.29■■□□□ 1
Gm10226O88253 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
Gm10226O88253 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC21.28■■□□□ 1
Gm10226O88253 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Gm10226O88253 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC21.25■□□□□ 0.99
Gm10226O88253 Zfp131-207ENSMUST00000224946 1783 ntBASIC21.24■□□□□ 0.99
Gm10226O88253 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC21.18■□□□□ 0.98
Gm10226O88253 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Gm10226O88253 AL845457.1-201ENSMUST00000197244 68 ntBASIC21.17■□□□□ 0.98
Gm10226O88253 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC21.17■□□□□ 0.98
Gm10226O88253 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Gm10226O88253 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Gm10226O88253 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Gm10226O88253 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Gm10226O88253 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Gm10226O88253 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Gm10226O88253 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Gm10226O88253 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Gm10226O88253 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC21.03■□□□□ 0.96
Gm10226O88253 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Gm10226O88253 AC166822.3-201ENSMUST00000227394 661 ntBASIC21.02■□□□□ 0.96
Gm10226O88253 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Gm10226O88253 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Gm10226O88253 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Gm10226O88253 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Gm10226O88253 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Gm10226O88253 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Gm10226O88253 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Gm10226O88253 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Gm10226O88253 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Gm10226O88253 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Gm10226O88253 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC20.87■□□□□ 0.93
Gm10226O88253 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Gm10226O88253 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Gm10226O88253 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
Gm10226O88253 Gm24804-201ENSMUST00000174982 85 ntBASIC20.82■□□□□ 0.92
Gm10226O88253 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Gm10226O88253 Mipep-204ENSMUST00000225043 1548 ntBASIC20.8■□□□□ 0.92
Gm10226O88253 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Gm10226O88253 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Gm10226O88253 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Gm10226O88253 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Gm10226O88253 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Gm10226O88253 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Gm10226O88253 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Gm10226O88253 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC20.72■□□□□ 0.91
Gm10226O88253 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Gm10226O88253 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Gm10226O88253 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Gm10226O88253 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Gm10226O88253 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Gm10226O88253 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Gm10226O88253 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Gm10226O88253 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Gm10226O88253 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Gm10226O88253 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Gm10226O88253 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Gm10226O88253 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Gm10226O88253 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC20.59■□□□□ 0.89
Gm10226O88253 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Gm10226O88253 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Gm10226O88253 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Gm10226O88253 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 51.7 ms