Protein–RNA interactions for Protein: O70477

Pknox1, Homeobox protein PKNOX1, mousemouse

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pknox1O70477 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
Pknox1O70477 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
Pknox1O70477 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC27.29■■□□□ 1.96
Pknox1O70477 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
Pknox1O70477 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC27.27■■□□□ 1.96
Pknox1O70477 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC27.22■■□□□ 1.95
Pknox1O70477 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
Pknox1O70477 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC27.08■■□□□ 1.93
Pknox1O70477 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC27.06■■□□□ 1.92
Pknox1O70477 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC27■■□□□ 1.91
Pknox1O70477 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
Pknox1O70477 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC26.99■■□□□ 1.91
Pknox1O70477 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
Pknox1O70477 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
Pknox1O70477 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC26.92■■□□□ 1.9
Pknox1O70477 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC26.9■■□□□ 1.9
Pknox1O70477 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC26.89■■□□□ 1.9
Pknox1O70477 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC26.89■■□□□ 1.9
Pknox1O70477 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.89
Pknox1O70477 Rab21-202ENSMUST00000218831 843 ntBASIC26.85■■□□□ 1.89
Pknox1O70477 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
Pknox1O70477 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
Pknox1O70477 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
Pknox1O70477 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
Pknox1O70477 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC26.78■■□□□ 1.88
Pknox1O70477 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
Pknox1O70477 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
Pknox1O70477 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC26.71■■□□□ 1.87
Pknox1O70477 Zfp131-207ENSMUST00000224946 1783 ntBASIC26.69■■□□□ 1.86
Pknox1O70477 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
Pknox1O70477 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
Pknox1O70477 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
Pknox1O70477 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC26.67■■□□□ 1.86
Pknox1O70477 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC26.66■■□□□ 1.86
Pknox1O70477 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Pknox1O70477 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC26.64■■□□□ 1.85
Pknox1O70477 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC26.62■■□□□ 1.85
Pknox1O70477 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC26.61■■□□□ 1.85
Pknox1O70477 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC26.61■■□□□ 1.85
Pknox1O70477 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC26.6■■□□□ 1.85
Pknox1O70477 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
Pknox1O70477 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
Pknox1O70477 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC26.58■■□□□ 1.85
Pknox1O70477 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC26.58■■□□□ 1.85
Pknox1O70477 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Pknox1O70477 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC26.51■■□□□ 1.83
Pknox1O70477 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Pknox1O70477 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
Pknox1O70477 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC26.5■■□□□ 1.83
Pknox1O70477 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC26.46■■□□□ 1.83
Pknox1O70477 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC26.45■■□□□ 1.83
Pknox1O70477 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
Pknox1O70477 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
Pknox1O70477 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC26.44■■□□□ 1.82
Pknox1O70477 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC26.43■■□□□ 1.82
Pknox1O70477 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC26.42■■□□□ 1.82
Pknox1O70477 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC26.4■■□□□ 1.82
Pknox1O70477 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
Pknox1O70477 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC26.39■■□□□ 1.81
Pknox1O70477 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
Pknox1O70477 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC26.34■■□□□ 1.81
Pknox1O70477 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC26.33■■□□□ 1.81
Pknox1O70477 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Pknox1O70477 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Pknox1O70477 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Pknox1O70477 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC26.29■■□□□ 1.8
Pknox1O70477 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Pknox1O70477 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Pknox1O70477 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
Pknox1O70477 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC26.26■■□□□ 1.79
Pknox1O70477 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC26.25■■□□□ 1.79
Pknox1O70477 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Pknox1O70477 Gm2415-204ENSMUST00000190235 2004 ntBASIC26.21■■□□□ 1.79
Pknox1O70477 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
Pknox1O70477 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
Pknox1O70477 Gm25262-201ENSMUST00000174934 133 ntBASIC26.14■■□□□ 1.78
Pknox1O70477 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC26.14■■□□□ 1.77
Pknox1O70477 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC26.12■■□□□ 1.77
Pknox1O70477 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
Pknox1O70477 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC26.08■■□□□ 1.77
Pknox1O70477 AL845457.1-201ENSMUST00000197244 68 ntBASIC26.05■■□□□ 1.76
Pknox1O70477 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC26.04■■□□□ 1.76
Pknox1O70477 Gm6658-202ENSMUST00000209493 1885 ntBASIC26.04■■□□□ 1.76
Pknox1O70477 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Pknox1O70477 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC26.01■■□□□ 1.75
Pknox1O70477 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC26■■□□□ 1.75
Pknox1O70477 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
Pknox1O70477 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
Pknox1O70477 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
Pknox1O70477 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
Pknox1O70477 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC25.92■■□□□ 1.74
Pknox1O70477 Mipep-204ENSMUST00000225043 1548 ntBASIC25.92■■□□□ 1.74
Pknox1O70477 AC153504.1-201ENSMUST00000218379 2290 ntBASIC25.88■■□□□ 1.73
Pknox1O70477 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Pknox1O70477 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
Pknox1O70477 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC25.87■■□□□ 1.73
Pknox1O70477 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC25.86■■□□□ 1.73
Pknox1O70477 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC25.86■■□□□ 1.73
Pknox1O70477 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
Pknox1O70477 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC25.8■■□□□ 1.72
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms