Protein–RNA interactions for Protein: O55142

Rpl35a, 60S ribosomal protein L35a, mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl35aO55142 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rpl35aO55142 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Rpl35aO55142 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rpl35aO55142 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rpl35aO55142 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC20.41■□□□□ 0.86
Rpl35aO55142 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Rpl35aO55142 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC20.38■□□□□ 0.85
Rpl35aO55142 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Rpl35aO55142 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rpl35aO55142 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC20.34■□□□□ 0.85
Rpl35aO55142 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rpl35aO55142 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rpl35aO55142 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rpl35aO55142 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Rpl35aO55142 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rpl35aO55142 Gm26115-201ENSMUST00000175605 87 ntBASIC20.27■□□□□ 0.84
Rpl35aO55142 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC20.27■□□□□ 0.84
Rpl35aO55142 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Rpl35aO55142 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC20.25■□□□□ 0.83
Rpl35aO55142 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rpl35aO55142 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rpl35aO55142 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Rpl35aO55142 Gm8109-201ENSMUST00000194076 746 ntBASIC20.2■□□□□ 0.82
Rpl35aO55142 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Rpl35aO55142 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rpl35aO55142 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rpl35aO55142 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC20.11■□□□□ 0.81
Rpl35aO55142 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Rpl35aO55142 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rpl35aO55142 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Rpl35aO55142 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rpl35aO55142 Gm17082-201ENSMUST00000166043 1091 ntBASIC20.04■□□□□ 0.8
Rpl35aO55142 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
Rpl35aO55142 Gm27322-201ENSMUST00000184007 104 ntBASIC20.01■□□□□ 0.79
Rpl35aO55142 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rpl35aO55142 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rpl35aO55142 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Rpl35aO55142 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Rpl35aO55142 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Rpl35aO55142 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC19.97■□□□□ 0.79
Rpl35aO55142 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rpl35aO55142 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Rpl35aO55142 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Rpl35aO55142 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Rpl35aO55142 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rpl35aO55142 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rpl35aO55142 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rpl35aO55142 Zfp131-207ENSMUST00000224946 1783 ntBASIC19.86■□□□□ 0.77
Rpl35aO55142 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Rpl35aO55142 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC19.85■□□□□ 0.77
Rpl35aO55142 AL845457.1-201ENSMUST00000197244 68 ntBASIC19.85■□□□□ 0.77
Rpl35aO55142 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Rpl35aO55142 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Rpl35aO55142 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC19.81■□□□□ 0.76
Rpl35aO55142 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rpl35aO55142 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Rpl35aO55142 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rpl35aO55142 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Rpl35aO55142 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rpl35aO55142 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rpl35aO55142 AC166822.3-201ENSMUST00000227394 661 ntBASIC19.67■□□□□ 0.74
Rpl35aO55142 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Rpl35aO55142 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rpl35aO55142 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rpl35aO55142 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Rpl35aO55142 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC19.64■□□□□ 0.74
Rpl35aO55142 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC19.63■□□□□ 0.73
Rpl35aO55142 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rpl35aO55142 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rpl35aO55142 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rpl35aO55142 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rpl35aO55142 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rpl35aO55142 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC19.58■□□□□ 0.72
Rpl35aO55142 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rpl35aO55142 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rpl35aO55142 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rpl35aO55142 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rpl35aO55142 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Rpl35aO55142 Gm24804-201ENSMUST00000174982 85 ntBASIC19.52■□□□□ 0.72
Rpl35aO55142 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Rpl35aO55142 Mipep-204ENSMUST00000225043 1548 ntBASIC19.51■□□□□ 0.71
Rpl35aO55142 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Rpl35aO55142 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Rpl35aO55142 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Rpl35aO55142 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rpl35aO55142 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC19.44■□□□□ 0.7
Rpl35aO55142 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Rpl35aO55142 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rpl35aO55142 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rpl35aO55142 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rpl35aO55142 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rpl35aO55142 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rpl35aO55142 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rpl35aO55142 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rpl35aO55142 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Rpl35aO55142 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Rpl35aO55142 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Rpl35aO55142 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rpl35aO55142 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Rpl35aO55142 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 15.3 ms