Protein–RNA interactions for Protein: O55134

Pcdh12, Protocadherin-12, mousemouse

Predictions only

Length 1,180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh12O55134 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
Pcdh12O55134 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC24.85■■□□□ 1.57
Pcdh12O55134 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC24.81■■□□□ 1.56
Pcdh12O55134 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
Pcdh12O55134 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC24.79■■□□□ 1.56
Pcdh12O55134 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC24.79■■□□□ 1.56
Pcdh12O55134 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
Pcdh12O55134 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Pcdh12O55134 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC24.69■■□□□ 1.54
Pcdh12O55134 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Pcdh12O55134 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Pcdh12O55134 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC24.64■■□□□ 1.53
Pcdh12O55134 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC24.62■■□□□ 1.53
Pcdh12O55134 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Pcdh12O55134 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Pcdh12O55134 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC24.6■■□□□ 1.53
Pcdh12O55134 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
Pcdh12O55134 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Pcdh12O55134 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC24.55■■□□□ 1.52
Pcdh12O55134 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC24.55■■□□□ 1.52
Pcdh12O55134 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC24.54■■□□□ 1.52
Pcdh12O55134 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC24.53■■□□□ 1.52
Pcdh12O55134 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Pcdh12O55134 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Pcdh12O55134 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC24.48■■□□□ 1.51
Pcdh12O55134 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC24.47■■□□□ 1.51
Pcdh12O55134 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Pcdh12O55134 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC24.44■■□□□ 1.5
Pcdh12O55134 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
Pcdh12O55134 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Pcdh12O55134 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
Pcdh12O55134 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC24.39■■□□□ 1.5
Pcdh12O55134 Gm26115-201ENSMUST00000175605 87 ntBASIC24.37■■□□□ 1.49
Pcdh12O55134 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
Pcdh12O55134 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Pcdh12O55134 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Pcdh12O55134 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC24.32■■□□□ 1.48
Pcdh12O55134 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
Pcdh12O55134 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC24.28■■□□□ 1.48
Pcdh12O55134 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Pcdh12O55134 Gm8109-201ENSMUST00000194076 746 ntBASIC24.23■■□□□ 1.47
Pcdh12O55134 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC24.23■■□□□ 1.47
Pcdh12O55134 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Pcdh12O55134 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Pcdh12O55134 Gm17082-201ENSMUST00000166043 1091 ntBASIC24.19■■□□□ 1.46
Pcdh12O55134 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC24.18■■□□□ 1.46
Pcdh12O55134 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Pcdh12O55134 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Pcdh12O55134 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC24.14■■□□□ 1.46
Pcdh12O55134 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Pcdh12O55134 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Pcdh12O55134 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
Pcdh12O55134 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC24.06■■□□□ 1.44
Pcdh12O55134 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC24.06■■□□□ 1.44
Pcdh12O55134 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC24.06■■□□□ 1.44
Pcdh12O55134 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Pcdh12O55134 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC24.05■■□□□ 1.44
Pcdh12O55134 Gm27322-201ENSMUST00000184007 104 ntBASIC24.05■■□□□ 1.44
Pcdh12O55134 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC24.04■■□□□ 1.44
Pcdh12O55134 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Pcdh12O55134 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC24.02■■□□□ 1.44
Pcdh12O55134 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
Pcdh12O55134 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC24■■□□□ 1.43
Pcdh12O55134 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC23.99■■□□□ 1.43
Pcdh12O55134 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Pcdh12O55134 Zfp131-207ENSMUST00000224946 1783 ntBASIC23.96■■□□□ 1.43
Pcdh12O55134 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC23.93■■□□□ 1.42
Pcdh12O55134 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
Pcdh12O55134 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC23.9■■□□□ 1.42
Pcdh12O55134 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC23.89■■□□□ 1.42
Pcdh12O55134 AL845457.1-201ENSMUST00000197244 68 ntBASIC23.88■■□□□ 1.41
Pcdh12O55134 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
Pcdh12O55134 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Pcdh12O55134 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Pcdh12O55134 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Pcdh12O55134 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
Pcdh12O55134 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Pcdh12O55134 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC23.76■■□□□ 1.39
Pcdh12O55134 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC23.74■■□□□ 1.39
Pcdh12O55134 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC23.73■■□□□ 1.39
Pcdh12O55134 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Pcdh12O55134 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Pcdh12O55134 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC23.72■■□□□ 1.39
Pcdh12O55134 AC166822.3-201ENSMUST00000227394 661 ntBASIC23.72■■□□□ 1.39
Pcdh12O55134 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC23.72■■□□□ 1.39
Pcdh12O55134 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Pcdh12O55134 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC23.71■■□□□ 1.39
Pcdh12O55134 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Pcdh12O55134 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
Pcdh12O55134 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Pcdh12O55134 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Pcdh12O55134 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Pcdh12O55134 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Pcdh12O55134 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Pcdh12O55134 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC23.56■■□□□ 1.36
Pcdh12O55134 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
Pcdh12O55134 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC23.52■■□□□ 1.36
Pcdh12O55134 Gm24804-201ENSMUST00000174982 85 ntBASIC23.52■■□□□ 1.36
Pcdh12O55134 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC23.49■■□□□ 1.35
Pcdh12O55134 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC23.49■■□□□ 1.35
Retrieved 100 of 76,532 protein–RNA pairs in 290.4 ms