Protein–RNA interactions for Protein: O35973

Per1, Period circadian protein homolog 1, mousemouse

Predictions only

Length 1,291 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Per1O35973 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC30.92■■■□□ 2.54
Per1O35973 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC30.87■■■□□ 2.53
Per1O35973 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
Per1O35973 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
Per1O35973 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC30.81■■■□□ 2.52
Per1O35973 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC30.79■■■□□ 2.52
Per1O35973 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC30.79■■■□□ 2.52
Per1O35973 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC30.76■■■□□ 2.51
Per1O35973 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
Per1O35973 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC30.74■■■□□ 2.51
Per1O35973 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC30.68■■■□□ 2.5
Per1O35973 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
Per1O35973 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC30.64■■■□□ 2.5
Per1O35973 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC30.62■■■□□ 2.49
Per1O35973 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
Per1O35973 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC30.54■■■□□ 2.48
Per1O35973 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC30.54■■■□□ 2.48
Per1O35973 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
Per1O35973 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC30.5■■■□□ 2.47
Per1O35973 Gm26115-201ENSMUST00000175605 87 ntBASIC30.48■■■□□ 2.47
Per1O35973 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
Per1O35973 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
Per1O35973 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
Per1O35973 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC30.4■■■□□ 2.46
Per1O35973 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
Per1O35973 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC30.36■■■□□ 2.45
Per1O35973 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC30.33■■■□□ 2.45
Per1O35973 Gm8109-201ENSMUST00000194076 746 ntBASIC30.33■■■□□ 2.45
Per1O35973 Gm17082-201ENSMUST00000166043 1091 ntBASIC30.32■■■□□ 2.44
Per1O35973 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC30.32■■■□□ 2.44
Per1O35973 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC30.31■■■□□ 2.44
Per1O35973 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
Per1O35973 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
Per1O35973 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
Per1O35973 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
Per1O35973 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
Per1O35973 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC30.21■■■□□ 2.43
Per1O35973 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC30.21■■■□□ 2.43
Per1O35973 Zfp131-207ENSMUST00000224946 1783 ntBASIC30.15■■■□□ 2.42
Per1O35973 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC30.12■■■□□ 2.41
Per1O35973 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC30.12■■■□□ 2.41
Per1O35973 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
Per1O35973 Gm27322-201ENSMUST00000184007 104 ntBASIC30.11■■■□□ 2.41
Per1O35973 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
Per1O35973 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC30.09■■■□□ 2.41
Per1O35973 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC30.04■■■□□ 2.4
Per1O35973 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC30.03■■■□□ 2.4
Per1O35973 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
Per1O35973 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC29.96■■■□□ 2.39
Per1O35973 AL845457.1-201ENSMUST00000197244 68 ntBASIC29.96■■■□□ 2.39
Per1O35973 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
Per1O35973 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC29.87■■■□□ 2.37
Per1O35973 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC29.86■■■□□ 2.37
Per1O35973 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
Per1O35973 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC29.81■■■□□ 2.36
Per1O35973 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC29.78■■■□□ 2.36
Per1O35973 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
Per1O35973 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.36
Per1O35973 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.35
Per1O35973 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC29.75■■■□□ 2.35
Per1O35973 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC29.74■■■□□ 2.35
Per1O35973 AC166822.3-201ENSMUST00000227394 661 ntBASIC29.73■■■□□ 2.35
Per1O35973 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC29.72■■■□□ 2.35
Per1O35973 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
Per1O35973 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
Per1O35973 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
Per1O35973 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
Per1O35973 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
Per1O35973 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC29.59■■■□□ 2.33
Per1O35973 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC29.58■■■□□ 2.33
Per1O35973 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
Per1O35973 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC29.54■■■□□ 2.32
Per1O35973 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC29.54■■■□□ 2.32
Per1O35973 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC29.51■■■□□ 2.31
Per1O35973 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC29.5■■■□□ 2.31
Per1O35973 Gm24804-201ENSMUST00000174982 85 ntBASIC29.49■■■□□ 2.31
Per1O35973 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
Per1O35973 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC29.48■■■□□ 2.31
Per1O35973 Mipep-204ENSMUST00000225043 1548 ntBASIC29.48■■■□□ 2.31
Per1O35973 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
Per1O35973 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
Per1O35973 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
Per1O35973 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC29.43■■■□□ 2.3
Per1O35973 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
Per1O35973 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
Per1O35973 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC29.38■■■□□ 2.29
Per1O35973 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC29.36■■■□□ 2.29
Per1O35973 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
Per1O35973 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
Per1O35973 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC29.33■■■□□ 2.29
Per1O35973 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC29.32■■■□□ 2.28
Per1O35973 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC29.31■■■□□ 2.28
Per1O35973 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC29.29■■■□□ 2.28
Per1O35973 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC29.24■■■□□ 2.27
Per1O35973 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
Per1O35973 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC29.22■■■□□ 2.27
Per1O35973 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.27
Per1O35973 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC29.18■■■□□ 2.26
Per1O35973 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC29.18■■■□□ 2.26
Per1O35973 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC29.18■■■□□ 2.26
Retrieved 100 of 76,532 protein–RNA pairs in 14.5 ms